RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 EIF1BO60739 113 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 HPNP05981 417 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 H2AFB1P0C5Y9 115 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 EIF1P41567 113 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 SLC6A9P48067 706 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 S100A10P60903 97 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 PRAMEF20Q5VT98 475 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 CRIP3Q6Q6R5 217 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 WDSUB1Q8N9V3 476 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 POC1AQ8NBT0 407 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 KNG1P01042 644 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 CSTBP04080 98 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 RPS2P15880 293 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 PVALBP20472 110 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 GUCA1AP43080 201 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 MST1LQ2TV78 715 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 CHRFAM7AQ494W8 412 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 SLC25A43Q8WUT9 341 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 SPACA9Q96E40 222 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 RASL10BQ96S79 203 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 DEFB126Q9BYW3 111 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 TLNRD1Q9H1K6 362 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 ELL3Q9HB65 397 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 GHRLQ9UBU3 117 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 HDGFL3Q9Y3E1 203 aa13.85□□□□□ -0.19
TSPAN4-211ENST00000468468 FOXI3A8MTJ6 420 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 LAMTOR5O43504 91 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 F12P00748 615 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 FCGR2AP12318 317 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 PTAFRP25105 342 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 UBE2V2Q15819 145 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 C10orf91Q5T1B1 145 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 H3F3CQ6NXT2 135 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 GALNTL5Q7Z4T8 443 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 FOXRED2Q8IWF2 684 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 MAML2Q8IZL2 1156 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 EDARADDQ8WWZ3 215 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 EMG1Q92979 244 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 S100A13Q99584 98 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 SLC5A7Q9GZV3 580 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 S100A6P06703 90 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 SFTPBP07988 381 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 PET100P0DJ07 73 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 FAHP16930 419 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 CTSSP25774 331 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 SLC35A1P78382 337 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 PJVKQ0ZLH3 352 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 IFI44Q8TCB0 444 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 RHBDD1Q8TEB9 315 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 SPSB2Q99619 263 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 HRH4Q9H3N8 390 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 ZNF701Q9NV72 531 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 LPAR3Q9UBY5 353 aa13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 CARHSP1Q9Y2V2 147 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 TNRC6BQ9UPQ9 1833 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-211ENST00000468468 OR5H15A6NDH6 313 aa13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 FIGNL2A6NMB9 653 aa13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 BTF3P20290 206 aaKnown RBP13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 THBS4P35443 961 aa13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 LSM6P62312 80 aaKnown RBP13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 ZNF239Q16600 458 aaKnown RBP13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 ZNF385CQ66K41 422 aaPredicted RBP13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 IL34Q6ZMJ4 242 aa13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 PPP1R3BQ86XI6 285 aa13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 NECAB3Q96P71 396 aaPredicted RBP13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 ACKR4Q9NPB9 350 aa13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 DNAJB11Q9UBS4 358 aa13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 C14orf166Q9Y224 244 aaKnown RBP13.83□□□□□ -0.19
TSPAN4-211ENST00000468468 LOC102725191A0A1B0GVB3 256 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 PMS2P1A4D2B8 440 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 IGLV3-1P01715 115 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 MSR1P21757 451 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 ALDH3B1P43353 468 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 CSNK1A1P48729 337 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 IL15RAQ13261 267 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 PHYHD1Q5SRE7 291 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 SPAG16Q8N0X2 631 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 LRRC18Q8N456 261 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 FADS6Q8N9I5 356 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 UQCC1Q9NVA1 299 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 DHRS3O75911 302 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 SNAPINO95295 136 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 DTX1Q86Y01 620 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 GJC3Q8NFK1 279 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 ADAMTS17Q8TE56 1095 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 PIGTQ969N2 578 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 ZDBF2Q9HCK1 2354 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 PIGLQ9Y2B2 252 aa13.83□□□□□ -0.2
TSPAN4-211ENST00000468468 SERPINE3A8MV23 424 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 ADH6P28332 368 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 PTGER4P35408 488 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 RFC3P40938 356 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 RPL7L1Q6DKI1 246 aaKnown RBP13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 NAT6Q93015 286 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 NELFAQ9H3P2 528 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 C19orf25Q9UFG5 118 aaPredicted RBP13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 MIOXQ9UGB7 285 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 MEMO1Q9Y316 297 aa13.82□□□□□ -0.2
TSPAN4-211ENST00000468468 FAM96BQ9Y3D0 163 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms