RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 HAAOP46952 286 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 GABRA2P47869 451 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 TGM4P49221 684 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 ACTG1P63261 375 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 BAMBIQ13145 260 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 SLC25A30Q5SVS4 291 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 ZBTB37Q5TC79 503 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 MEDAGQ5VYS4 303 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 RUSC1-AS1Q66K80 236 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 STUMQ69YW2 141 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 DOK3Q7L591 496 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 SLC36A1Q7Z2H8 476 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 ANGPTL5Q86XS5 388 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 PDZD9Q8IXQ8 264 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 ENTHD1Q8IYW4 607 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 PRSS35Q8N3Z0 413 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 PNLDC1Q8NA58 520 aaKnown RBP9.55□□□□□ -0.88
CDHR3-205ENST00000468143 ZNF671Q8TAW3 534 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 TRMT10AQ8TBZ6 339 aaKnown RBP9.55□□□□□ -0.88
CDHR3-205ENST00000468143 NPRL2Q8WTW4 380 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 H1FXQ92522 213 aaKnown RBP9.55□□□□□ -0.88
CDHR3-205ENST00000468143 TMIGD2Q96BF3 282 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 C12orf43Q96C57 262 aaKnown RBP9.55□□□□□ -0.88
CDHR3-205ENST00000468143 WDFY2Q96P53 400 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 TBX15Q96SF7 602 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 ADI1Q9BV57 179 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 CNTD2Q9H8S5 307 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 AMBNQ9NP70 447 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 FAM118AQ9NWS6 357 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 NLKQ9UBE8 527 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 ATRQ13535 2644 aa9.55□□□□□ -0.88
CDHR3-205ENST00000468143 LOC100130705A0A1B0GUX0 176 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 FAM230AA0A1W2PPH8 454 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 OR5B21A6NL26 309 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 OR2AT4A6NND4 320 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 J3QLW9 94 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 J3QRE1 110 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 DLGAP1O14490 977 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 SYNGR1O43759 233 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 INMTO95050 263 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 ECDO95905 644 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-205ENST00000468143 ZNF19P17023 458 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 GABRB1P18505 474 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 KIR3DL2P43630 455 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 OR12D2P58182 307 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 UBA52P62987 128 aaKnown RBP9.54□□□□□ -0.88
CDHR3-205ENST00000468143 PRB3Q04118 309 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-205ENST00000468143 DGUOKQ16854 277 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 LRRC36Q1X8D7 754 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 LRRC10Q5BKY1 277 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 ATPAF1Q5TC12 328 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-205ENST00000468143 GPR157Q5UAW9 335 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 METTL11BQ5VVY1 283 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 TMEM42Q69YG0 159 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 ZNF788Q6ZQV5 615 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 FAM220AQ7Z4H9 259 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 ANGPTL6Q8NI99 470 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 FAM216AQ8WUB2 273 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 ZFAND2BQ8WV99 257 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 GCDHQ92947 438 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-205ENST00000468143 STMN2Q93045 179 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 ITFG2Q969R8 447 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 RNF166Q96A37 237 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-205ENST00000468143 LGALS12Q96DT0 336 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 GAFA1Q96PS6 74 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 ELL3Q9HB65 397 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-205ENST00000468143 ONECUT1Q9UBC0 465 aa9.54□□□□□ -0.88
CDHR3-205ENST00000468143 RPUSD1Q9UJJ7 312 aaKnown RBP9.54□□□□□ -0.88
CDHR3-205ENST00000468143 IGKV1D-17A0A075B6S4 117 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 CENPVL3A0A0U1RRI6 287 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 PQLC2LA1A4F0 135 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 ANKRD61A6NGH8 418 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 DNAJC9-AS1A6NH13 148 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 NKX6-3A6NJ46 265 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 ANKRD65E5RJM6 399 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 ACAA1P09110 424 aaPredicted RBP9.53□□□□□ -0.88
CDHR3-205ENST00000468143 DBTP11182 482 aaKnown RBP9.53□□□□□ -0.88
CDHR3-205ENST00000468143 PSG2P11465 335 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 MMP9P14780 707 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 NDUFB7P17568 137 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 CCL1P22362 96 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 CEBPDP49716 269 aaPredicted RBP9.53□□□□□ -0.88
CDHR3-205ENST00000468143 DLX1P56177 255 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 NANOS3P60323 173 aaKnown RBP9.53□□□□□ -0.88
CDHR3-205ENST00000468143 ISL1P61371 349 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 ACTC1P68032 377 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 ACTA1P68133 377 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 IL13RA1P78552 427 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 ZNF91Q05481 1191 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 UBE2V2Q15819 145 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 TUSC1Q2TAM9 212 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 DEFB112Q30KQ8 113 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 CDONQ4KMG0 1287 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 LPCAT4Q643R3 524 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 C12orf54Q6X4T0 127 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 Q6ZSR3 168 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 LHFPL3Q86UP9 236 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 CALHM1Q8IU99 346 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 ZNRF1Q8ND25 227 aa9.53□□□□□ -0.88
CDHR3-205ENST00000468143 RHOXF1Q8NHV9 184 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms