RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 GABRA5P31644 462 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 GTF2A1P52655 376 aaPredicted RBP13.15□□□□□ -0.3
TSSC4-208ENST00000467308 PAX2Q02962 417 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 HNRNPA0Q13151 305 aaKnown RBP13.15□□□□□ -0.3
TSSC4-208ENST00000467308 TAF13Q15543 124 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 TRAM1Q15629 374 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 ZNF774Q6NX45 483 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 BTNL3Q6UXE8 466 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 SPATC1Q76KD6 591 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 CATSPERDQ86XM0 798 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 ANKRD13BQ86YJ7 626 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 OR2Z1Q8NG97 314 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 ZNF420Q8TAQ5 688 aaPredicted RBP13.15□□□□□ -0.3
TSSC4-208ENST00000467308 PGLYRP3Q96LB9 341 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 FAM192AQ9GZU8 254 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 SP140LQ9H930 580 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 TBCCD1Q9NVR7 557 aa13.15□□□□□ -0.3
TSSC4-208ENST00000467308 SF3B6Q9Y3B4 125 aaKnown RBP13.15□□□□□ -0.3
TSSC4-208ENST00000467308 SIRT4Q9Y6E7 314 aaPredicted RBP13.15□□□□□ -0.3
TSSC4-208ENST00000467308 TMEM269A0A1B0GVZ9 245 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 TMEM212A6NML5 194 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 OR4C45A6NMZ5 311 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 CEACAM18A8MTB9 384 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 CD36P16671 472 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 KITLGP21583 273 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 HSD11B1P28845 292 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 HTR5AP47898 357 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 TMBIM6P55061 237 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 TPTEP56180 551 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 NANOS3P60323 173 aaKnown RBP13.14□□□□□ -0.31
TSSC4-208ENST00000467308 TIMM50Q3ZCQ8 353 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 LIPKQ5VXJ0 399 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 DRAM2Q6UX65 266 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 GDPGP1Q6ZNW5 385 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 PRSS45Q7RTY3 260 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 MS4A15Q8N5U1 240 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 WFDC12Q8WWY7 111 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 TAF15Q92804 592 aaKnown RBP eCLIP13.14□□□□□ -0.31
TSSC4-208ENST00000467308 FUNDC2Q9BWH2 189 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 SSBP3Q9BWW4 388 aaPredicted RBP13.14□□□□□ -0.31
TSSC4-208ENST00000467308 PRDM13Q9H4Q3 707 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 FRRS1LQ9P0K9 344 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 NUFIP1Q9UHK0 495 aaKnown RBP13.14□□□□□ -0.31
TSSC4-208ENST00000467308 CEPT1Q9Y6K0 416 aa13.14□□□□□ -0.31
TSSC4-208ENST00000467308 TRBV2A0A0J9YWF9 115 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 LOC110117498-PIK3R3F6TDL0 507 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 IFNL4K9M1U5 179 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 M0R135 149 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 RPP14O95059 124 aaKnown RBP13.13□□□□□ -0.31
TSSC4-208ENST00000467308 GABARAPO95166 117 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 KNG1P01042 644 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 ISG15P05161 165 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 WNT2P09544 360 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 ACSM4P0C7M7 580 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 PSMB10P40306 273 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 Q6ZR03 302 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 COLCA1Q6ZS62 124 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 ELMOD2Q8IZ81 293 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 PRSS35Q8N3Z0 413 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 ITLN1Q8WWA0 313 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 GHSRQ92847 366 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 ITFG2Q969R8 447 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 DACT3Q96B18 629 aaPredicted RBP13.13□□□□□ -0.31
TSSC4-208ENST00000467308 ZNF799Q96GE5 643 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 ENPP5Q9UJA9 477 aa13.13□□□□□ -0.31
TSSC4-208ENST00000467308 IGHV3OR16-10A0A075B7F0 116 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 IGHV2-70DA0A0C4DH43 119 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 J3QW42 95 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 SC5DO75845 299 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 ZFPL1O95159 310 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 HLA-DPB1P04440 258 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 OMGP23515 440 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 RBMXP38159 391 aaKnown RBP13.12□□□□□ -0.31
TSSC4-208ENST00000467308 KIR3DL2P43630 455 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 CX3CR1P49238 355 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
TSSC4-208ENST00000467308 MFGE8Q08431 387 aaPredicted RBP13.12□□□□□ -0.31
TSSC4-208ENST00000467308 YIF1BQ5BJH7 314 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 WDR38Q5JTN6 314 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 C17orf107Q6ZR85 190 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 SLC16A12Q6ZSM3 486 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 ZFP41Q8N8Y5 198 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 OR52H1Q8NGJ2 320 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 OR4F5Q8NH21 305 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 OR5AK2Q8NH90 309 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 RAB2BQ8WUD1 216 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 DGCR14Q96DF8 476 aaKnown RBP13.12□□□□□ -0.31
TSSC4-208ENST00000467308 OR2V2Q96R30 315 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 COMMD4Q9H0A8 199 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 BEX1Q9HBH7 125 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 GCM1Q9NP62 436 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 OR52A1Q9UKL2 312 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 STUB1Q9UNE7 303 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 ZNF281Q9Y2X9 895 aa13.12□□□□□ -0.31
TSSC4-208ENST00000467308 SOX21Q9Y651 276 aaPredicted RBP13.12□□□□□ -0.31
TSSC4-208ENST00000467308 TRAV40A0A0B4J280 105 aa13.11□□□□□ -0.31
TSSC4-208ENST00000467308 A0A0U1RQV5 110 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms