RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 NUBPLQ8TB37 319 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 PIGXQ8TBF5 258 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 GPR151Q8TDV0 419 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF431Q8TF32 576 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 UBTD2Q8WUN7 234 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 CRYGNQ8WXF5 182 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RGP1Q92546 391 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ASB9Q96DX5 294 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 CERS2Q96G23 380 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SFRP2Q96HF1 295 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 CPB2Q96IY4 423 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 LINC00167Q96N53 147 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RBP7Q96R05 134 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OR8B4Q96RC9 309 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SPAG8Q99932 426 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 FEM1AQ9BSK4 669 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 CHRDL1Q9BU40 450 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SUCNR1Q9BXA5 334 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SNHG12Q9BXW3 62 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TBL1XR1Q9BZK7 514 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 PORCNQ9H237 461 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 WDR54Q9H977 334 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ANKRA2Q9H9E1 313 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ADGRL4Q9HBW9 690 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF160Q9HCG1 818 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OR2S2Q9NQN1 319 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 AGPAT4Q9NRZ5 378 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SCN3BQ9NY72 215 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 COPS7AQ9UBW8 275 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 LGALS13Q9UHV8 139 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 CRLS1Q9UJA2 301 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 MRTO4Q9UKD2 239 aaKnown RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF490Q9ULM2 529 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ANGPT4Q9Y264 503 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RASD1Q9Y272 281 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TRAPPC4Q9Y296 219 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ZFP30Q9Y2G7 519 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ATG4BQ9Y4P1 393 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RBM7Q9Y580 266 aaKnown RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ARL5AQ9Y689 179 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 MTCH2Q9Y6C9 303 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF142P52746 1687 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 CLTCQ00610 1675 aaKnown RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 BCL9LQ86UU0 1499 aa2.71□□□□□ -1.97
VPS13D-203ENST00000466732 CCDC88AQ3V6T2 1871 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 NCAPD2Q15021 1401 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 TRAV26-1A0A087WT03 109 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 A0A096LPI6 279 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 IGHV3-35A0A0C4DH35 117 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 TRBV2A0A0J9YWF9 115 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 FAM240BA0A1B0GVZ2 78 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 VSTM2BA6NLU5 285 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 OR11H12B2RN74 326 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SEC14L6B5MCN3 397 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 C9J4A7 227 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 D6RAR5 112 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 RNASEK-C17orf49H0YIS7 233 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 GFYI3L273 518 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 K7ERI5 159 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 K7ERU9 68 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 EMC8O43402 210 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SNAI2O43623 268 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SSNA1O43805 119 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 DUX1O43812 170 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SOX15O60248 233 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 FAM189A1O60320 539 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 CDC40O60508 579 aaKnown RBP eCLIP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 GABARAPO95166 117 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 TXNDC12O95881 172 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 PDYNP01213 254 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 CD2P06729 351 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SNRPCP09234 159 aaKnown RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 P0C879 139 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 CPN1P15169 458 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 TSPAN8P19075 237 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 TBPP20226 339 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 FGF7P21781 194 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SLC2A5P22732 501 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MYL9P24844 172 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 HMGB2P26583 209 aaKnown RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 IDH2P48735 452 aaKnown RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 RAB9AP51151 201 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 CDKN2DP55273 166 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 RRAS2P62070 204 aaPredicted RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 ADARB1P78563 741 aaKnown RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MRPS10P82664 201 aaKnown RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 FAM3AP98173 230 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 DEFA5Q01523 94 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 PRPSAP1Q14558 356 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SLC10A1Q14973 349 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 KIAA0040Q15053 153 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 QPRTQ15274 297 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SPA17Q15506 151 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SURF2Q15527 256 aaPredicted RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 TAF9Q16594 264 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 UBE2SQ16763 222 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 LRRC26Q2I0M4 334 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 PYCR3Q53H96 274 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SPIN3Q5JUX0 258 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms