RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 SCARB1Q8WTV0 552 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 CPNE2Q96FN4 548 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 S100A13Q99584 98 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 PRSS50Q9UI38 385 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 KCNMB2Q9Y691 235 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 ZNF35P13682 527 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 RPA2P15927 270 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 GNB3P16520 340 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 FAM3AP98173 230 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 FGL1Q08830 312 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 HLXQ14774 488 aaPredicted RBP18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 COLCA1Q6ZS62 124 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 TMUB2Q71RG4 321 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 P4HA3Q7Z4N8 544 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 OR5D18Q8NGL1 313 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 SPSB4Q96A44 273 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 KCNN3Q9UGI6 736 aa18.87■□□□□ 0.61
PDLIM2-216ENST00000464275 A0A1W2PP11 408 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 DISC1C4P0D8 188 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 HLA-HP01893 362 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 EDN3P14138 238 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 RPS27AP62979 156 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 ZNF92Q03936 586 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 TMEM42Q69YG0 159 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 C11orf88Q6PI97 169 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 C1QL2Q7Z5L3 287 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 DPPA2Q7Z7J5 298 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 STEAP2Q8NFT2 490 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 RBPMSQ93062 196 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 RAB3CQ96E17 227 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 PRRT1Q99946 306 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 C12orf49Q9H741 205 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 hCG_1807616A0A1W2PRN6 198 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 SOCS1O15524 211 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 OR4E1P0C645 316 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 OR8B8Q15620 311 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 PNLIPRP3Q17RR3 467 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 FAM89BQ8N5H3 189 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 C12orf45Q8N5I9 185 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 GMPPAQ96IJ6 420 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 POFUT1Q9H488 388 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 GLRX2Q9NS18 164 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 SESN1Q9Y6P5 492 aa18.86■□□□□ 0.61
PDLIM2-216ENST00000464275 LOC100509620A0A075B734 347 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 RFPL4AA6NLU0 287 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 RFPL4AL1F8VTS6 287 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 NRASP01111 189 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 HIST1H1DP16402 221 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 TBPP20226 339 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 MPGP29372 298 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 OR3A2P47893 321 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 SRSF4Q08170 494 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 FBXW9Q5XUX1 488 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 OR51T1Q8NGJ9 327 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 NUDCD2Q8WVJ2 157 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 TINAGL1Q9GZM7 467 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 IFT46Q9NQC8 304 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 RDH8Q9NYR8 311 aa18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 TMA7Q9Y2S6 64 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-216ENST00000464275 ZSCAN5BA6NJL1 495 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 M0QYG6 137 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 AQP7O14520 342 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 ARPC5O15511 151 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 AMY2AP04746 511 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 CD79AP11912 226 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 MGMTP16455 207 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 MTCP1P56278 107 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 RAB1AP62820 205 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 LHFPL2Q6ZUX7 228 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 TECTBQ96PL2 329 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 TM2D1Q9BX74 207 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 CLCF1Q9UBD9 225 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 SS18L1O75177 396 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 CD8AP01732 235 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 ZNF735P0CB33 412 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 TMEM50BP56557 158 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 GK2Q14410 553 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 PLAC9Q5JTB6 97 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 GSG1LQ6UXU4 331 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 BPIFB2Q8N4F0 458 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 OR1K1Q8NGR3 316 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 OR6K3Q8NGY3 331 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 ARL6Q9H0F7 186 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 DOCK7Q96N67 2140 aa18.84■□□□□ 0.61
PDLIM2-216ENST00000464275 FXYD6-FXYD2A0A087WZ82 144 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 ZNF503-AS2A6NEH8 195 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 SSX5O60225 188 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 SERPINA2P20848 420 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 PLP2Q04941 152 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 TMEM65Q6PI78 240 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 SLC51BQ86UW2 128 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 ZDHHC22Q8N966 263 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 BORCS8Q96FH0 119 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 FXYD6Q9H0Q3 95 aa18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.83■□□□□ 0.61
PDLIM2-216ENST00000464275 ZNF816-ZNF321PA0A0X1KG74 233 aa18.82■□□□□ 0.6
PDLIM2-216ENST00000464275 A0A1B0GW55 424 aa18.82■□□□□ 0.6
PDLIM2-216ENST00000464275 FAM230AA0A1W2PPH8 454 aa18.82■□□□□ 0.6
PDLIM2-216ENST00000464275 PROB1E7EW31 1015 aa18.82■□□□□ 0.6
PDLIM2-216ENST00000464275 DUX4L2P0CJ85 424 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms