RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 NBEAL2Q6ZNJ1 2754 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 H3BN98 237 aa18.36■□□□□ 0.53
USP4-208ENST00000464168 PAICSP22234 425 aaKnown RBP18.36■□□□□ 0.53
USP4-208ENST00000464168 FAM189A2Q15884 450 aa18.36■□□□□ 0.53
USP4-208ENST00000464168 DMRTC1Q5HYR2 192 aa18.36■□□□□ 0.53
USP4-208ENST00000464168 CEP78Q5JTW2 689 aa18.36■□□□□ 0.53
USP4-208ENST00000464168 PLBD1Q6P4A8 553 aa18.36■□□□□ 0.53
USP4-208ENST00000464168 ZNF671Q8TAW3 534 aa18.36■□□□□ 0.53
USP4-208ENST00000464168 AQP3Q92482 292 aa18.36■□□□□ 0.53
USP4-208ENST00000464168 CLPTM1LQ96KA5 538 aa18.36■□□□□ 0.53
USP4-208ENST00000464168 CHST1O43916 411 aa18.35■□□□□ 0.53
USP4-208ENST00000464168 MAP2K3P46734 347 aa18.35■□□□□ 0.53
USP4-208ENST00000464168 TMEM200BQ69YZ2 307 aa18.35■□□□□ 0.53
USP4-208ENST00000464168 OR5K1Q8NHB7 308 aa18.35■□□□□ 0.53
USP4-208ENST00000464168 FAM81AQ8TBF8 368 aa18.35■□□□□ 0.53
USP4-208ENST00000464168 NIPAL2Q9H841 368 aa18.35■□□□□ 0.53
USP4-208ENST00000464168 HEXA-AS1Q9H8Q6 139 aa18.35■□□□□ 0.53
USP4-208ENST00000464168 LRP12Q9Y561 859 aa18.35■□□□□ 0.53
USP4-208ENST00000464168 PRR23D1E9PI22 279 aaPredicted RBP18.34■□□□□ 0.53
USP4-208ENST00000464168 MTRF1O75570 445 aaKnown RBP18.34■□□□□ 0.53
USP4-208ENST00000464168 PRR23D2P0DMB1 279 aaPredicted RBP18.34■□□□□ 0.53
USP4-208ENST00000464168 VSIG10L2P0DP72 767 aa18.34■□□□□ 0.53
USP4-208ENST00000464168 CAPZA1P52907 286 aa18.34■□□□□ 0.53
USP4-208ENST00000464168 LCN8Q6JVE9 175 aa18.34■□□□□ 0.53
USP4-208ENST00000464168 THAP5Q7Z6K1 395 aa18.34■□□□□ 0.53
USP4-208ENST00000464168 CD177Q8N6Q3 437 aa18.34■□□□□ 0.53
USP4-208ENST00000464168 OR5A2Q8NGI9 324 aa18.34■□□□□ 0.53
USP4-208ENST00000464168 NPFFR1Q9GZQ6 430 aa18.34■□□□□ 0.53
USP4-208ENST00000464168 RASL12Q9NYN1 266 aa18.34■□□□□ 0.53
USP4-208ENST00000464168 A0A0U1RQV5 110 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 RFPL4AA6NLU0 287 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 RFPL4AL1F8VTS6 287 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 ALOX5APP20292 161 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 BMXP51813 675 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 HCCSP53701 268 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 ERVFRD-1P60508 538 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 RPL31P62899 125 aaKnown RBP18.33■□□□□ 0.52
USP4-208ENST00000464168 GINS1Q14691 196 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 FAM98BQ52LJ0 330 aaKnown RBP18.33■□□□□ 0.52
USP4-208ENST00000464168 HAGHLQ6PII5 290 aaPredicted RBP18.33■□□□□ 0.52
USP4-208ENST00000464168 ACP7Q6ZNF0 438 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 TRPM8Q7Z2W7 1104 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 REC114Q7Z4M0 266 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 DHFR2Q86XF0 187 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 CPOQ8IVL8 374 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 LYG1Q8N1E2 194 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 GIPC3Q8TF64 312 aa18.33■□□□□ 0.52
USP4-208ENST00000464168 OR5B21A6NL26 309 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 PIN1P1O15428 100 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 PRODHO43272 600 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 MS4A2Q01362 244 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 LIAT1Q6ZQX7 453 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 MOB3CQ70IA8 216 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 KRT77Q7Z794 578 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 BBS1Q8NFJ9 593 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 PPP1R14AQ96A00 147 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 ZNF488Q96MN9 340 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 ZNF702PQ9H963 129 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 FAM206AQ9NX38 181 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 DNAH3Q8TD57 4116 aa18.32■□□□□ 0.52
USP4-208ENST00000464168 ACOD1A6NK06 481 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 COX7A1P24310 79 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 PRDX2P32119 198 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 TRIM25Q14258 630 aaKnown RBP18.31■□□□□ 0.52
USP4-208ENST00000464168 OXLD1Q5BKU9 147 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 DTX3Q8N9I9 347 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 POC1AQ8NBT0 407 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 OR4M1Q8NGD0 313 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 ITFG2Q969R8 447 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 NKX3-1Q99801 234 aaPredicted RBP18.31■□□□□ 0.52
USP4-208ENST00000464168 MUC13Q9H3R2 512 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 SERTAD4Q9NUC0 356 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 LAMP5Q9UJQ1 280 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 ARL2BPQ9Y2Y0 163 aa18.31■□□□□ 0.52
USP4-208ENST00000464168 TMEM269A0A1B0GVZ9 245 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 A0A1W2PPH5 198 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 ARRDC5A6NEK1 342 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 FAM90A8PA6NJQ4 464 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 VGLL3A8MV65 326 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 ALX3O95076 343 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 ATP6V1B1P15313 513 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 CCL3L1P16619 93 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 SLC2A5P22732 501 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 LGALS4P56470 323 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 RIPPLY1Q0D2K3 151 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 GK3PQ14409 553 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 HABP2Q14520 560 aaPredicted RBP18.3■□□□□ 0.52
USP4-208ENST00000464168 SMIM21Q3B7S5 101 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 NSUN5P1Q3KNT7 163 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 DEGS2Q6QHC5 323 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 LHFPL4Q7Z7J7 247 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 TMEM179BQ7Z7N9 219 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 DYNAPQ8N1N2 210 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 Q8N2B8 174 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 ZNF561Q8N587 486 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 OR2T27Q8NH04 317 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 OR51E1Q8TCB6 317 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 GPR84Q9NQS5 396 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 USE1Q9NZ43 259 aa18.3■□□□□ 0.52
USP4-208ENST00000464168 B2RBV5 119 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms