RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 SLC35B4Q969S0 331 aa3.28□□□□□ -1.88
CCDC50-203ENST00000460064 RERGQ96A58 199 aaPredicted RBP3.28□□□□□ -1.88
CCDC50-203ENST00000460064 RBBP8Q99708 897 aa3.28□□□□□ -1.88
CCDC50-203ENST00000460064 CTRCQ99895 268 aa3.28□□□□□ -1.88
CCDC50-203ENST00000460064 C7orf50Q9BRJ6 194 aaKnown RBP3.28□□□□□ -1.88
CCDC50-203ENST00000460064 GGTLC1Q9BX51 225 aa3.28□□□□□ -1.88
CCDC50-203ENST00000460064 SAMD10Q9BYL1 202 aa3.28□□□□□ -1.88
CCDC50-203ENST00000460064 CLEC2DQ9UHP7 191 aa3.28□□□□□ -1.88
CCDC50-203ENST00000460064 SLIT3O75094 1523 aa3.28□□□□□ -1.88
CCDC50-203ENST00000460064 PTPRTO14522 1441 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 TMEM150BA6NC51 233 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 HACD1B0YJ81 288 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 CENPBD1B2RD01 187 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 RNASEK-C17orf49H0YIS7 233 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 H0YJW9 148 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 H3BN98 237 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 RAD1O60671 282 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 SLC19A2O60779 497 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 RPP14O95059 124 aaKnown RBP3.27□□□□□ -1.89
CCDC50-203ENST00000460064 RPN2P04844 631 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 LINC00869P0C866 280 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 RD3LP0DJH9 198 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 C1GALT1C1LP0DN25 315 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 CD70P32970 193 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 CXCL12P48061 93 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 GTF2A1P52655 376 aaPredicted RBP3.27□□□□□ -1.89
CCDC50-203ENST00000460064 CLDN6P56747 220 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 GLO1Q04760 184 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 STX5Q13190 355 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 EXOC3L4Q17RC7 722 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 ABCA11PQ4W5N1 156 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 COQ5Q5HYK3 327 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 TTC33Q6PID6 262 aaPredicted RBP3.27□□□□□ -1.89
CCDC50-203ENST00000460064 PLEKHG7Q6ZR37 379 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 RAB43Q86YS6 212 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 TCP10LQ8TDR4 215 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 OTUB2Q96DC9 234 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 L3HYPDHQ96EM0 354 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 RNF157Q96PX1 679 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 SPIN2AQ99865 258 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 SPIN2BQ9BPZ2 258 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 RSG1Q9BU20 258 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 MAP1LC3CQ9BXW4 147 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 OR51V1Q9H2C8 321 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 SLC38A1Q9H2H9 487 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 REEP1Q9H902 201 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 IFNKQ9P0W0 207 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 SAMHD1Q9Y3Z3 626 aaKnown RBP3.27□□□□□ -1.89
CCDC50-203ENST00000460064 URGCP-MRPS24S4R325 110 aa3.27□□□□□ -1.89
CCDC50-203ENST00000460064 TNFRSF11BO00300 401 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 RFXANKO14593 260 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 EIF1BO60739 113 aaKnown RBP3.26□□□□□ -1.89
CCDC50-203ENST00000460064 ADAP1O75689 374 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 CIAO1O76071 339 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 GLSO94925 669 aaPredicted RBP3.26□□□□□ -1.89
CCDC50-203ENST00000460064 VAPBO95292 243 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 WISP3O95389 354 aaPredicted RBP3.26□□□□□ -1.89
CCDC50-203ENST00000460064 CTXN2P0C2S0 81 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 GFAPP14136 432 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 SYT1P21579 422 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 GTF2H1P32780 548 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 EIF1P41567 113 aaKnown RBP3.26□□□□□ -1.89
CCDC50-203ENST00000460064 ACTR1BP42025 376 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 MLF1P58340 268 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 RAB14P61106 215 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 ACTBL2Q562R1 376 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 OR2T5Q6IEZ7 315 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 CLEC18BQ6UXF7 455 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 MDP1Q86V88 176 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 BOD1L2Q8IYS8 172 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 H1FOOQ8IZA3 346 aaPredicted RBP3.26□□□□□ -1.89
CCDC50-203ENST00000460064 ARHGAP18Q8N392 663 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 OR2T29Q8NH02 315 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 LINC01560Q8TB33 94 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 TEX47Q8TBZ9 253 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 TMA16Q96EY4 203 aaKnown RBP3.26□□□□□ -1.89
CCDC50-203ENST00000460064 NAPGQ99747 312 aaPredicted RBP3.26□□□□□ -1.89
CCDC50-203ENST00000460064 DRC3Q9H069 523 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 C1orf198Q9H425 327 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 C8orf4Q9NR00 106 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 SIRT7Q9NRC8 400 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 C8orf17Q9NRJ1 99 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 OPN4Q9UHM6 478 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 ENOPH1Q9UHY7 261 aa3.26□□□□□ -1.89
CCDC50-203ENST00000460064 NUP214P35658 2090 aaPredicted RBP3.26□□□□□ -1.89
CCDC50-203ENST00000460064 ANKRD30AQ9BXX3 1397 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 MYO10Q9HD67 2058 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 BRCA1P38398 1863 aaKnown RBP3.25□□□□□ -1.89
CCDC50-203ENST00000460064 A0A0A6YYH2 397 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 C7orf66A4D0T2 115 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 A6NJ64 397 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 CENPXA8MT69 81 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 ETHE1O95571 254 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 HLA-DQB1P01920 261 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 DCNP07585 359 aaKnown RBP3.25□□□□□ -1.89
CCDC50-203ENST00000460064 OCMP0CE72 109 aaPredicted RBP3.25□□□□□ -1.89
CCDC50-203ENST00000460064 CFL1P23528 166 aaKnown RBP3.25□□□□□ -1.89
CCDC50-203ENST00000460064 SERPINB9P50453 376 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 OR2B8PP59922 312 aa3.25□□□□□ -1.89
CCDC50-203ENST00000460064 PNOCQ13519 176 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms