RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 RNFT2Q96EX2 444 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 ZNF48Q96MX3 618 aaPredicted RBP13.43□□□□□ -0.26
CPSF6-203ENST00000456847 WDFY2Q96P53 400 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 ADI1Q9BV57 179 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 RPUSD1Q9UJJ7 312 aaKnown RBP13.43□□□□□ -0.26
CPSF6-203ENST00000456847 A0A1B0GTI1 187 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 A6NIN4 97 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 FCN3O75636 299 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 SULT1C4O75897 302 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 ACTC1P68032 377 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 ACTA1P68133 377 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 C11orf91Q3C1V1 193 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 TP53I3Q53FA7 332 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 MEDAGQ5VYS4 303 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 PQLC1Q8N2U9 271 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 MBOAT4Q96T53 435 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 DNTTIP1Q9H147 329 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 ZMAT3Q9HA38 289 aaKnown RBP13.43□□□□□ -0.26
CPSF6-203ENST00000456847 ONECUT1Q9UBC0 465 aa13.43□□□□□ -0.26
CPSF6-203ENST00000456847 SNTNA6NMZ2 147 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 SYT7O43581 403 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 TFF1P04155 84 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 SELLP14151 372 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 SNRPGP62308 76 aaKnown RBP13.42□□□□□ -0.26
CPSF6-203ENST00000456847 ARF6P62330 175 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 IL13RA1P78552 427 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 ZNF85Q03923 595 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 RUSC1-AS1Q66K80 236 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 C9orf139Q6ZV77 190 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 AQP3Q92482 292 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 RORBQ92753 470 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 STMN2Q93045 179 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 ZDHHC16Q969W1 377 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 MED30Q96HR3 178 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 TBX15Q96SF7 602 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 ACOXLQ9NUZ1 547 aa13.42□□□□□ -0.26
CPSF6-203ENST00000456847 SOX21Q9Y651 276 aaPredicted RBP13.42□□□□□ -0.26
CPSF6-203ENST00000456847 MDFIC2A0A1B0GVS7 189 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 DAPL1A0PJW8 107 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 OR2AT4A6NND4 320 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 DHRS7CA6NNS2 312 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 DLGAP1O14490 977 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 BAG2O95816 211 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 HAAOP46952 286 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 PDCD1Q15116 288 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 ZBTB49Q6ZSB9 765 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 ZNF573Q86YE8 665 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 GAFA1Q96PS6 74 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 CNTD2Q9H8S5 307 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 SLC25A10Q9UBX3 287 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-203ENST00000456847 J3QT63 122 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 GPR37O15354 613 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 MMP9P14780 707 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 NDUFB7P17568 137 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 AMY2BP19961 511 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 CCL1P22362 96 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 PRTN3P24158 256 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 TGM4P49221 684 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 OCLNQ16625 522 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 ATPAF1Q5TC12 328 aaPredicted RBP13.41□□□□□ -0.26
CPSF6-203ENST00000456847 ZNF788Q6ZQV5 615 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 CMTM4Q8IZR5 234 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 ANGPTL6Q8NI99 470 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 TRMT10AQ8TBZ6 339 aaKnown RBP13.41□□□□□ -0.26
CPSF6-203ENST00000456847 LHX4Q969G2 390 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 SIRPDQ9H106 197 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 POLDIP2Q9Y2S7 368 aa13.41□□□□□ -0.26
CPSF6-203ENST00000456847 STAB1Q9NY15 2570 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 ANKRD61A6NGH8 418 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 BPIFB3P59826 476 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 TUSC1Q2TAM9 212 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 SMIM21Q3B7S5 101 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 TMEM42Q69YG0 159 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 POC1AQ8NBT0 407 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 TMEM185AQ8NFB2 350 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 NPRL2Q8WTW4 380 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 GATAD2BQ8WXI9 593 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 ZNF488Q96MN9 340 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 AASSQ9UDR5 926 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 SLC7A11Q9UPY5 501 aa13.4□□□□□ -0.26
CPSF6-203ENST00000456847 LOC107986453A0A1B0GWG9 222 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 FAM230AA0A1W2PPH8 454 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 TMEM89A2RUT3 159 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 SIGLEC5O15389 551 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 SYNGR1O43759 233 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 UBCP0CG48 685 aaKnown RBP13.39□□□□□ -0.27
CPSF6-203ENST00000456847 CAPZA1P52907 286 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 DGUOKQ16854 277 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 DEFB112Q30KQ8 113 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 SLC25A30Q5SVS4 291 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 PRSS35Q8N3Z0 413 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 CCDC54Q8NEL0 328 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 SLC25A28Q96A46 364 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 SLC29A1Q99808 456 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 DCTN5Q9BTE1 182 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 RASL12Q9NYN1 266 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 PCDHGB1Q9Y5G3 927 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 KPTNQ9Y664 436 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 CENPVL3A0A0U1RRI6 287 aa13.39□□□□□ -0.27
CPSF6-203ENST00000456847 A0A1W2PQ09 198 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms