RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 HPNP05981 417 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 GP1BBP13224 206 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF17P17021 662 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 BTF3P20290 206 aaKnown RBP9.07□□□□□ -0.96
CLIP4-208ENST00000456385 DLK1P80370 383 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 TFF2Q03403 129 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 C4orf17Q53FE4 359 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 TSPO2Q5TGU0 170 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 KLHL24Q6TFL4 600 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 STX12Q86Y82 276 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 SGPP2Q8IWX5 399 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 NPRL2Q8WTW4 380 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 C11orf40Q8WZ69 217 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 CPNE4Q96A23 557 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-208ENST00000456385 FAM71F1Q96KD3 344 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-208ENST00000456385 OR10A2Q9H208 303 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 PLEKHA2Q9HB19 425 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 CPAMD8Q8IZJ3 1885 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 OR5H15A6NDH6 313 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 OR5H1A6NKK0 313 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 E5RGE8 158 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 MS4A18H0YCH9 400 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 HSD17B6O14756 317 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 BLVRBP30043 206 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-208ENST00000456385 CTNNB1P35222 781 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 SLC6A8P48029 635 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 TAS2R46P59540 309 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 UBE2KP61086 200 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 PKIAP61925 76 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 RUNX3Q13761 415 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 SSX2Q16385 188 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 MS4A18Q3C1V0 323 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 OR2T2Q6IF00 324 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 DEGS2Q6QHC5 323 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 LYZL2Q7Z4W2 148 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 OR52M1Q8NGK5 317 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 SPPL3Q8TCT6 385 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 SLC37A2Q8TED4 501 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 ABHD5Q8WTS1 349 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 SSX3Q99909 188 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 HDHD3Q9BSH5 251 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-208ENST00000456385 LIME1Q9H400 295 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 PISDQ9UG56 409 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 NSG2Q9Y328 171 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 PHF3Q92576 2039 aaKnown RBP9.06□□□□□ -0.96
CLIP4-208ENST00000456385 IGKV1-9A0A0C4DH69 117 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 RBFOX3A6NFN3 312 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF724A8MTY0 619 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 RPL36A-HNRNPH2H7BZ11 118 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 IGHMP01871 453 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 QDPRP09417 244 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 SUCLG1P53597 346 aaKnown RBP9.06□□□□□ -0.96
CLIP4-208ENST00000456385 RND3P61587 244 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 NKX6-1P78426 367 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-208ENST00000456385 POU3F1Q03052 451 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-208ENST00000456385 HIKESHIQ53FT3 197 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 OOSP2Q86WS3 158 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 ZFP62Q8NB50 900 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-208ENST00000456385 ASB10Q8WXI3 467 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 SHDQ96IW2 340 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 KCNK17Q96T54 332 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 SLCO1B1Q9Y6L6 691 aa9.06□□□□□ -0.96
CLIP4-208ENST00000456385 CRYM-AS1A6NIL9 109 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 NPIPA5E9PKD4 350 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 K7N7A8 449 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 SNRPCP09234 159 aaKnown RBP9.05□□□□□ -0.96
CLIP4-208ENST00000456385 TRGC1P0CF51 173 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 PGCP20142 388 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 IL12BP29460 328 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 AFF3P51826 1226 aaKnown RBP9.05□□□□□ -0.96
CLIP4-208ENST00000456385 POLR2HP52434 150 aaKnown RBP9.05□□□□□ -0.96
CLIP4-208ENST00000456385 HSD11B2P80365 405 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 PRTGQ2VWP7 1150 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 C6orf201Q7Z4U5 140 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 TGIF2LXQ8IUE1 241 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 LRRC18Q8N456 261 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 CYB561D1Q8N8Q1 229 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF248Q8NDW4 579 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 OR10AD1Q8NGE0 317 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 OR14K1Q8NGZ2 314 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 FRZBQ92765 325 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 NUDT22Q9BRQ3 303 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 PECRQ9BY49 303 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 TBL1XR1Q9BZK7 514 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 GPR84Q9NQS5 396 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 MCTS1Q9ULC4 181 aaKnown RBP9.05□□□□□ -0.96
CLIP4-208ENST00000456385 NPIPA1Q9UND3 350 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 STRAPQ9Y3F4 350 aaKnown RBP9.05□□□□□ -0.96
CLIP4-208ENST00000456385 LIPGQ9Y5X9 500 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 RTTNQ86VV8 2226 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 C2orf72A6NCS6 295 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 TLCD2A6NGC4 264 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 GPR137BO60478 399 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 AHSA1O95433 338 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 OR5AC1P0C628 307 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 RGS19P49795 217 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 PIGPP57054 158 aa9.05□□□□□ -0.96
CLIP4-208ENST00000456385 TMEM176BQ3YBM2 270 aaPredicted RBP9.05□□□□□ -0.96
CLIP4-208ENST00000456385 SPSB3Q6PJ21 355 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms