RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ATPAF1Q5TC12 328 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 MARCH1Q8TCQ1 289 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 DPCDQ9BVM2 203 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 CLEC4MQ9H2X3 399 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 SLA2Q9H6Q3 261 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 EHFQ9NZC4 300 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 GPR160Q9UJ42 338 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 ZNF816-ZNF321PA0A0X1KG74 233 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 SNRPGP15A8MWD9 76 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 CCSO14618 274 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 CD37P11049 281 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 ARPC4P59998 168 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 TSC22D1Q15714 1073 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 ZNF585AQ6P3V2 769 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 SLC25A26Q70HW3 274 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 OR2AK2Q8NG84 335 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 NEK7Q8TDX7 302 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 CCDC120Q96HB5 630 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 BCO1Q9HAY6 547 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 ZNF224Q9NZL3 707 aa11.86□□□□□ -0.51
CLK3-203ENST00000454830 ZNF629Q9UEG4 869 aaPredicted RBP11.86□□□□□ -0.51
CLK3-203ENST00000454830 ZNF503-AS2A6NEH8 195 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 ZNF724A8MTY0 619 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 CD34P28906 385 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 OPRM1P35372 400 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 IDH3GP51553 393 aaPredicted RBP11.85□□□□□ -0.51
CLK3-203ENST00000454830 FBXL14Q8N1E6 418 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 SNAPC3Q92966 411 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 ELMOD3Q96FG2 381 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 LINC00470Q9BZP3 86 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 GHRLQ9UBU3 117 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 STARD10Q9Y365 291 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 IGHV3-64DA0A0J9YX35 117 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 OR7C1O76099 320 aaPredicted RBP11.85□□□□□ -0.51
CLK3-203ENST00000454830 AGTR1P30556 359 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 GMFBP60983 142 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 IL13RA1P78552 427 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 MICBQ29980 383 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 FAAP24Q9BTP7 215 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 RGCCQ9H4X1 137 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 NPDC1Q9NQX5 325 aaPredicted RBP11.85□□□□□ -0.51
CLK3-203ENST00000454830 ASPMQ8IZT6 3477 aa11.85□□□□□ -0.51
CLK3-203ENST00000454830 ZNF891A8MT65 544 aaPredicted RBP11.84□□□□□ -0.51
CLK3-203ENST00000454830 F5H5P2 479 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 ARPC5O15511 151 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 PGAM2P15259 253 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 ARR3P36575 388 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 C2orf68Q2NKX9 166 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 C6orf183Q5T699 404 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 LHFPL2Q6ZUX7 228 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 MED12LQ86YW9 2145 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 CDH26Q8IXH8 852 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 C9orf62Q8N4C0 152 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 SEC22AQ96IW7 307 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 PECRQ9BY49 303 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 B3GNT2Q9NY97 397 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 ICE1Q9Y2F5 2266 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 hCG_38984A0A1B0GV85 526 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 ZNF780AO75290 641 aaPredicted RBP11.84□□□□□ -0.51
CLK3-203ENST00000454830 IGLV3-1P01715 115 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 HTR2BP41595 481 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 GK2Q14410 553 aaPredicted RBP11.84□□□□□ -0.51
CLK3-203ENST00000454830 ATXN7L3Q14CW9 347 aaPredicted RBP11.84□□□□□ -0.51
CLK3-203ENST00000454830 STK11Q15831 433 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 PIGYQ3MUY2 71 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 FBXW9Q5XUX1 488 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 LAMTOR1Q6IAA8 161 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 ZADH2Q8N4Q0 377 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 CCDC54Q8NEL0 328 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 OR13C8Q8NGS7 320 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 NANOS1Q8WY41 292 aaKnown RBP11.84□□□□□ -0.51
CLK3-203ENST00000454830 DYRK2Q92630 601 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 FBXW5Q969U6 566 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 C10orf35Q96D05 121 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 GON7Q9BXV9 100 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 ZNF442Q9H7R0 627 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 VSIG4Q9Y279 399 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 HOXC12P31275 282 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 GPM6AP51674 278 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 SLC36A1Q7Z2H8 476 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 TMEM17Q86X19 198 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 APOBEC3DQ96AK3 386 aaPredicted RBP11.84□□□□□ -0.51
CLK3-203ENST00000454830 SLC23A1Q9UHI7 598 aa11.84□□□□□ -0.51
CLK3-203ENST00000454830 IGKV1-27A0A075B6S5 117 aa11.83□□□□□ -0.51
CLK3-203ENST00000454830 C13orf42A0A1B0GVH6 325 aa11.83□□□□□ -0.51
CLK3-203ENST00000454830 HSPB6O14558 160 aa11.83□□□□□ -0.51
CLK3-203ENST00000454830 RAP2BP61225 183 aa11.83□□□□□ -0.51
CLK3-203ENST00000454830 DHRS2Q13268 280 aa11.83□□□□□ -0.51
CLK3-203ENST00000454830 PCNPQ8WW12 178 aaKnown RBP11.83□□□□□ -0.51
CLK3-203ENST00000454830 MED30Q96HR3 178 aa11.83□□□□□ -0.51
CLK3-203ENST00000454830 CMSS1Q9BQ75 279 aaKnown RBP11.83□□□□□ -0.51
CLK3-203ENST00000454830 CHMP1AQ9HD42 196 aaPredicted RBP11.83□□□□□ -0.51
CLK3-203ENST00000454830 ST3GAL6Q9Y274 331 aa11.83□□□□□ -0.51
CLK3-203ENST00000454830 OR2AT4A6NND4 320 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 L7N2F9 121 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 CEACAM1P13688 526 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 MPGP29372 298 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 HAAOP46952 286 aa11.83□□□□□ -0.52
CLK3-203ENST00000454830 FUT6P51993 359 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms