RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 PPP1R3CQ9UQK1 317 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 LOC105371242A0A075B767 164 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 A0A0A6YYJ9 748 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 IGLV3-1P01715 115 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 CCL1P22362 96 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 VBP1P61758 197 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 LCN2P80188 198 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 HLXQ14774 488 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 ACSM3Q53FZ2 586 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 C22orf42Q6IC83 251 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 TMEM91Q6ZNR0 172 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 Q6ZR03 302 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 USP43Q70EL4 1123 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 CCDC54Q8NEL0 328 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 OR13C5Q8NGS8 318 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 ZNF418Q8TF45 676 aaPredicted RBP15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 ITLN1Q8WWA0 313 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 KCTD7Q96MP8 289 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 OR2V2Q96R30 315 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 C1QTNF5Q9BXJ0 243 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 RGCCQ9H4X1 137 aa15.17■□□□□ 0.02
SQSTM1-204ENST00000453046 A0A1B0GVI7 797 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 ZNF879B4DU55 563 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 J3QLI3 93 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 ARL6IP5O75915 188 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 OCM2P0CE71 109 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 GATA3P23771 443 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 LSM3P62310 102 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 CNPY1Q3B7I2 92 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 OR2T2Q6IF00 324 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 FBXW12Q6X9E4 464 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 COLCA1Q6ZS62 124 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 SPICQ8N5J4 248 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 TSEN15Q8WW01 171 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 DERL3Q96Q80 235 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 OR14A2Q96R54 314 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 TMPRSS13Q9BYE2 586 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 DCAF16Q9NXF7 216 aa15.16■□□□□ 0.02
SQSTM1-204ENST00000453046 HAX1O00165 279 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 AVPP01185 164 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 IGHV2-70P01814 119 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 CD2P06729 351 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 UCHL1P09936 223 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 ZNF12P17014 697 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 EPHA1P21709 976 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 HNRNPA0Q13151 305 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 SPCS2Q15005 226 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 ODF4Q2M2E3 257 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 UNQ9370/PRO34162Q6UXP9 181 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 C1orf229Q6ZS94 237 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 DOK3Q7L591 496 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 CEACAM19Q7Z692 300 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 OR8G5Q8NG78 346 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 OR13G1Q8NGZ3 307 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 OR10AC1Q8NH08 325 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 NDNFQ8TB73 568 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 DCSTAMPQ9H295 470 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 C7orf69Q9H7B7 122 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 DHDHQ9UQ10 334 aa15.15■□□□□ 0.02
SQSTM1-204ENST00000453046 WNK2Q9Y3S1 2297 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 TRBV5-7A0A0A0MS05 114 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 P2RY10O00398 339 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 TBX1O43435 398 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 XRCC2O43543 280 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 SYT7O43581 403 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 FOXH1O75593 365 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 VENTXO95231 258 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 LCATP04180 440 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 ADRA2CP18825 462 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 CFL1P23528 166 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 MYL9P24844 172 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 SERPINB10P48595 397 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 BTG1P62324 171 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 INSL4Q14641 139 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 SNAI3Q3KNW1 292 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 Q6ZSR3 168 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 COMMD2Q86X83 199 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 RDH10Q8IZV5 341 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 BHLHE23Q8NDY6 225 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 OR10AD1Q8NGE0 317 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 OR51A4Q8NGJ6 313 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 NANPQ8TBE9 248 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 OR51E1Q8TCB6 317 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 ITFG2Q969R8 447 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 PPP1R14AQ96A00 147 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 OPA3Q9H6K4 179 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 GPR84Q9NQS5 396 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 PTTG2Q9NZH5 202 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 ZNF319Q9P2F9 582 aa15.14■□□□□ 0.01
SQSTM1-204ENST00000453046 DYSFO75923 2080 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 A0A1B0GTI1 187 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 DHRS7CA6NNS2 312 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 IL1AP01583 271 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 SELEP16581 610 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 FSTP19883 344 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 ANOS1P23352 680 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 RBMXP38159 391 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 MTNR1BP49286 362 aa15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 SRP9P49458 86 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-204ENST00000453046 MALLQ13021 153 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms