RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SERPINA2P20848 420 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 RAD52P43351 418 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 PDZK1IP1Q13113 114 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 C3orf36Q3SXR2 165 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 CDNFQ49AH0 187 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 PLA1AQ53H76 456 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 CADM3Q8N126 398 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 CHST4Q8NCG5 386 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 BHLHE23Q8NDY6 225 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 PXT1Q8NFP0 134 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 OR1J1Q8NGS3 322 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 CMBLQ96DG6 245 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 MUCL1Q96DR8 90 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 ZMAT3Q9HA38 289 aaKnown RBP12.25□□□□□ -0.45
USP39-207ENST00000450066 NAP1L6A6NFF2 107 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 SPRY1O43609 319 aaPredicted RBP12.24□□□□□ -0.45
USP39-207ENST00000450066 CSF1P09603 554 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 ACTBP60709 375 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 ACTG1P63261 375 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 RSU1Q15404 277 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 OR2T2Q6IF00 324 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 Q6ZTK2 550 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 C1orf174Q8IYL3 243 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 OR5A2Q8NGI9 324 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 OR51T1Q8NGJ9 327 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 OR10K1Q8NGX5 313 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 HPSE2Q8WWQ2 592 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 CCDC120Q96HB5 630 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 HIST1H2AAQ96QV6 131 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 VKORC1Q9BQB6 163 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 TM2D1Q9BX74 207 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 SELENOIQ9C0D9 397 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 ELOVL5Q9NYP7 299 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 IL36GQ9NZH8 169 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 MRPL15Q9P015 296 aaKnown RBP12.24□□□□□ -0.45
USP39-207ENST00000450066 JKAMPQ9P055 326 aa12.24□□□□□ -0.45
USP39-207ENST00000450066 MED19A0JLT2 244 aaPredicted RBP12.23□□□□□ -0.45
USP39-207ENST00000450066 TMEM235A6NFC5 223 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 ANGPTL7O43827 346 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 PCGF3Q3KNV8 242 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 ZSCAN4Q8NAM6 433 aaPredicted RBP12.23□□□□□ -0.45
USP39-207ENST00000450066 KDF1Q8NAX2 398 aaPredicted RBP12.23□□□□□ -0.45
USP39-207ENST00000450066 SLC25A40Q8TBP6 338 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 OR5P3Q8WZ94 311 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 RNF170Q96K19 258 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 USB1Q9BQ65 265 aaKnown RBP12.23□□□□□ -0.45
USP39-207ENST00000450066 MARVELD1Q9BSK0 173 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 ACTR6Q9GZN1 396 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 HRASLSQ9HDD0 168 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 COPZ2Q9P299 210 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 IGHV2OR16-5A0A0B4J2B6 119 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 SOCS1O15524 211 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 LILRA1O75019 489 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 PLATP00750 562 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 MT-ND4P03905 459 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 CSTBP04080 98 aaKnown RBP12.23□□□□□ -0.45
USP39-207ENST00000450066 GSTP1P09211 210 aaKnown RBP12.23□□□□□ -0.45
USP39-207ENST00000450066 GTF2F2P13984 249 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 SELEP16581 610 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 CPT2P23786 658 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 GPM6AP51674 278 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 CASP6P55212 293 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 ERVS71-1P61550 626 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 FAM27E3Q08E93 113 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 PPA1Q15181 289 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 OLFML2AQ68BL7 652 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 TMEM211Q6ICI0 200 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 GLCCI1Q86VQ1 547 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 CALHM1Q8IU99 346 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 ST6GALNAC3Q8NDV1 305 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 RND1Q92730 232 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 CREB3L1Q96BA8 519 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 MARS2Q96GW9 593 aaKnown RBP12.23□□□□□ -0.45
USP39-207ENST00000450066 DMRTA2Q96SC8 542 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 BCL2L14Q9BZR8 327 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 FGF23Q9GZV9 251 aaPredicted RBP12.23□□□□□ -0.45
USP39-207ENST00000450066 DPAGT1Q9H3H5 408 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 PCDHB16Q9NRJ7 776 aa12.23□□□□□ -0.45
USP39-207ENST00000450066 ELF5Q9UKW6 265 aaPredicted RBP12.23□□□□□ -0.45
USP39-207ENST00000450066 IGKV1-12A0A0C4DH73 117 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 FOXI3A8MTJ6 420 aaPredicted RBP12.22□□□□□ -0.45
USP39-207ENST00000450066 IGKV1D-12P01611 117 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
USP39-207ENST00000450066 GNB3P16520 340 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 TMEM50BP56557 158 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 PLAC9Q5JTB6 97 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 NCCRP1Q6ZVX7 275 aaPredicted RBP12.22□□□□□ -0.45
USP39-207ENST00000450066 LIX1LQ8IVB5 337 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 ZNF611Q8N823 705 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 OR51F2Q8NH61 342 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 KLF14Q8TD94 323 aaPredicted RBP12.22□□□□□ -0.45
USP39-207ENST00000450066 UPRTQ96BW1 309 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 MRPS24Q96EL2 167 aaKnown RBP12.22□□□□□ -0.45
USP39-207ENST00000450066 Q96M66 194 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 CACNG6Q9BXT2 260 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 ZNF107Q9UII5 783 aaPredicted RBP12.22□□□□□ -0.45
USP39-207ENST00000450066 ATRXP46100 2492 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 OR5B21A6NL26 309 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms