RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 OR4D10Q8NGI6 311 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 OR4C3Q8NH37 302 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 SPACA9Q96E40 222 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-204ENST00000448183 ZC3HAV1LQ96H79 300 aaKnown RBP6.97□□□□□ -1.29
NEDD9-204ENST00000448183 ALKBH3Q96Q83 286 aaPredicted RBP6.97□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF426Q9BUY5 554 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 MAP1LC3BQ9GZQ8 125 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 GOLT1BQ9Y3E0 138 aa6.97□□□□□ -1.29
NEDD9-204ENST00000448183 A0A1W2PPC4 97 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 TNFSF11O14788 317 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 TOX3O15405 576 aaPredicted RBP6.96□□□□□ -1.29
NEDD9-204ENST00000448183 IL2RAP01589 272 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 SEMG1P04279 462 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 CYC1P08574 325 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 CCKARP32238 428 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 GALR1P47211 349 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 FAM3AP98173 230 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 OR5I1Q13606 314 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 IL13RA2Q14627 380 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 C9orf152Q5JTZ5 239 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 PTCRAQ6ISU1 281 aaPredicted RBP6.96□□□□□ -1.29
NEDD9-204ENST00000448183 FA2HQ7L5A8 372 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 OR2C3Q8N628 320 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 OR2V1Q8NHB1 315 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 BCL7CQ8WUZ0 217 aaPredicted RBP6.96□□□□□ -1.29
NEDD9-204ENST00000448183 POM121L2Q96KW2 1035 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 MS4A10Q96PG2 267 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 FBXL17Q9UF56 701 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 NAT8BQ9UHF3 227 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF391Q9UJN7 358 aa6.96□□□□□ -1.29
NEDD9-204ENST00000448183 CD200P41217 278 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 PTGFRP43088 359 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 LIMK1P53667 647 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 TCTN1Q2MV58 587 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 MOB1BQ7L9L4 216 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 TCTEX1D1Q8N7M0 179 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 CLDN23Q96B33 292 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 PROCRQ9UNN8 238 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 GLI3P10071 1580 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM30CPA0ZSE6 113 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 OR2W5A6NFC9 320 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 LILRA5A6NI73 299 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 GABRA1P14867 456 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 RPL13AP40429 203 aaKnown RBP6.96□□□□□ -1.3
NEDD9-204ENST00000448183 ASCL1P50553 236 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 SLC38A11Q08AI6 406 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 FUT7Q11130 342 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 CST9Q5W186 159 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 C11orf42Q8N5U0 333 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 OR1N1Q8NGS0 311 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 WDR34Q96EX3 536 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 TRIB1Q96RU8 372 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 OCIAD1Q9NX40 245 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 SIPA1L3O60292 1781 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-204ENST00000448183 AP4M1O00189 453 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 C1QAP02745 245 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 RPL29P47914 159 aaKnown RBP6.96□□□□□ -1.3
NEDD9-204ENST00000448183 GNG3P63215 75 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM183BQ1AE95 376 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 FFAR4Q5NUL3 377 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 B3GNTL1Q67FW5 361 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-204ENST00000448183 OR2A2Q6IF42 318 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 FAHD2BQ6P2I3 314 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-204ENST00000448183 Q8IYB0 196 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 STPG2Q8N412 459 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 IFI44Q8TCB0 444 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM230Q96A57 120 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 ZG16BQ96DA0 208 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 FAHD2AQ96GK7 314 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 NAA60Q9H7X0 242 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 DNAJB12Q9NXW2 375 aaKnown RBP6.96□□□□□ -1.3
NEDD9-204ENST00000448183 PPIL1Q9Y3C6 166 aa6.96□□□□□ -1.3
NEDD9-204ENST00000448183 A0A1W2PNV4 684 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM218A2RU14 115 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 CTDSPLO15194 276 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ADAM20O43506 726 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 GSTZ1O43708 216 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 DHRS3O75911 302 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 INHBBP09529 407 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 PPIAP62937 165 aaKnown RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 FMODQ06828 376 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 MYBPHQ13203 477 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ETFDHQ16134 617 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 THSD4Q6ZMP0 1018 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 BVESQ8NE79 360 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF596Q8TC21 504 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ACY3Q96HD9 319 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 LINC00052Q96N35 136 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 HES4Q9HCC6 221 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 LSM2Q9Y333 95 aaKnown RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 TIMM9Q9Y5J7 89 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 FAM24AA6NFZ4 105 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 LEUTXA8MZ59 168 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 GPM6AP51674 278 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 DSCR4P56555 118 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 HLA-DRB3P79483 266 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 CLPPQ16740 277 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM196Q5HYL7 178 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 DMKNQ6E0U4 476 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms