RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 SSX2Q16385 188 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 ZAR1Q86SH2 424 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 C20orf196Q8IYI0 205 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 CLDN23Q96B33 292 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 UQCC2Q9BRT2 126 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 CYSLTR2Q9NS75 346 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 ASAH1Q13510 395 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 SNTB1Q13884 538 aaKnown RBP15.82■□□□□ 0.12
ATG9A-215ENST00000446716 OR10AD1Q8NGE0 317 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 AUNIPQ9H7T9 357 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 GPR31O00270 319 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 MOB3AQ96BX8 217 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 UCN2Q96RP3 112 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 TAF9BQ9HBM6 251 aa15.82■□□□□ 0.12
ATG9A-215ENST00000446716 MRPS18BQ9Y676 258 aaKnown RBP15.82■□□□□ 0.12
ATG9A-215ENST00000446716 TRAV38-1A0A0B4J264 116 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 DCTDP32321 178 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 ETFDHQ16134 617 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 CD300LDQ6UXZ3 194 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 DDOQ99489 341 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 SAP30LQ9HAJ7 183 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 ADGRL4Q9HBW9 690 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 HES4Q9HCC6 221 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 SNRPNP63162 240 aaKnown RBP15.81■□□□□ 0.12
ATG9A-215ENST00000446716 TGIF1Q15583 401 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 PLA1AQ53H76 456 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 MFSD4AQ8N468 514 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 POM121L2Q96KW2 1035 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 ATXN7O15265 892 aaPredicted RBP15.81■□□□□ 0.12
ATG9A-215ENST00000446716 SLC23A3Q6PIS1 610 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 OR2W3Q7Z3T1 314 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 FBXW5Q969U6 566 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 DEFB108AA8MXU0 73 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 FGF5P12034 268 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 PRSS12P56730 875 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 BPIFB3P59826 476 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 FLI1Q01543 452 aaPredicted RBP15.81■□□□□ 0.12
ATG9A-215ENST00000446716 NHLRC1Q6VVB1 395 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 LSMEM1Q8N8F7 131 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 ZNF721Q8TF20 911 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 PTP4A1Q93096 173 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 GMPPAQ96IJ6 420 aaPredicted RBP15.81■□□□□ 0.12
ATG9A-215ENST00000446716 MAGT1Q9H0U3 335 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 ZNF705FA8MVS1 300 aaPredicted RBP15.81■□□□□ 0.12
ATG9A-215ENST00000446716 AKR7A2O43488 359 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 ZNF705DP0CH99 300 aaPredicted RBP15.81■□□□□ 0.12
ATG9A-215ENST00000446716 ZNF705BP0CI00 300 aaPredicted RBP15.81■□□□□ 0.12
ATG9A-215ENST00000446716 LSM6P62312 80 aaKnown RBP15.81■□□□□ 0.12
ATG9A-215ENST00000446716 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 SVBPQ8N300 66 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 TMEM104Q8NE00 496 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 DYNC2LI1Q8TCX1 351 aa15.81■□□□□ 0.12
ATG9A-215ENST00000446716 SMLR1H3BR10 107 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 DVL1O14640 695 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 CEACAM3P40198 252 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 DVL1P1P54792 670 aaPredicted RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 CREB3L2Q70SY1 520 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 TMEM171Q8WVE6 324 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 NUP214P35658 2090 aaPredicted RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 CEACAM6P40199 344 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 ZFP36L2P47974 494 aaKnown RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 PRRX1P54821 245 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 SSTP61278 116 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 SSBP1Q04837 148 aaKnown RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 TRAT1Q6PIZ9 186 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 SLC38A6Q8IZM9 456 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 NIPSNAP3BQ9BS92 247 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 MS4A5Q9H3V2 200 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 PSENENQ9NZ42 101 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 TRAF3IP2O43734 574 aaPredicted RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 CRYZL1O95825 349 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 UBE2MP61081 183 aaKnown RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 OR4S1Q8NGB4 309 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 LIN37Q96GY3 246 aaPredicted RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 RAB33BQ9H082 229 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 ZNF275Q9NSD4 429 aaPredicted RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 TMEM74BQ9NUR3 256 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 MTCH1Q9NZJ7 389 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 GIPP09681 153 aaPredicted RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 H2AFB1P0C5Y9 115 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 RTP5Q14D33 572 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 TERB2Q8NHR7 220 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 ERGIC1Q969X5 290 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 YIPF6Q96EC8 236 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 GNPNAT1Q96EK6 184 aaPredicted RBP15.8■□□□□ 0.12
ATG9A-215ENST00000446716 PSG11Q9UQ72 335 aa15.8■□□□□ 0.12
ATG9A-215ENST00000446716 ZNF638Q14966 1978 aaKnown RBP15.79■□□□□ 0.12
ATG9A-215ENST00000446716 DNPH1O43598 174 aa15.79■□□□□ 0.12
ATG9A-215ENST00000446716 KRASP01116 189 aa15.79■□□□□ 0.12
ATG9A-215ENST00000446716 OR4E1P0C645 316 aa15.79■□□□□ 0.12
ATG9A-215ENST00000446716 PSMB6P28072 239 aa15.79■□□□□ 0.12
ATG9A-215ENST00000446716 FBXW9Q5XUX1 488 aa15.79■□□□□ 0.12
ATG9A-215ENST00000446716 ARRDC1Q8N5I2 433 aa15.79■□□□□ 0.12
ATG9A-215ENST00000446716 CNOT1A5YKK6 2376 aaKnown RBP15.79■□□□□ 0.12
ATG9A-215ENST00000446716 EP300Q09472 2414 aaPredicted RBP15.79■□□□□ 0.12
ATG9A-215ENST00000446716 RPS10-NUDT3A0A1W2PQS6 291 aa15.79■□□□□ 0.12
ATG9A-215ENST00000446716 OR7C2O60412 319 aa15.79■□□□□ 0.12
ATG9A-215ENST00000446716 AQP8O94778 261 aa15.79■□□□□ 0.12
ATG9A-215ENST00000446716 HRASP01112 189 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms