RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ABCB9Q9NP78 766 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 NOX4Q9NPH5 578 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 G6PC2Q9NQR9 355 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 PRSS50Q9UI38 385 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 TIMM10BQ9Y5J6 103 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 ANXA2P2A6NMY6 339 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 WDR1O75083 606 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 LINC00614P0C842 121 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 UBCP0CG48 685 aaKnown RBP7.06□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF32P17041 273 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 CTSSP25774 331 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 PTGER4P35408 488 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 PMELP40967 661 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 GAGE1Q13065 139 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 RAB35Q15286 201 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 LINC00303Q3SY05 128 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF324BQ6AW86 544 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-201ENST00000442201 SVBPQ8N300 66 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 C9orf106Q8NAJ2 232 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 OR10AC1Q8NH08 325 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 AP3S1Q92572 193 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 HHLA2Q9UM44 414 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 A8MXE2 369 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 ISG15P05161 165 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 AGAP20933 346 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 ACHEP22303 614 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 MPGP29372 298 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 MAGEB1P43366 347 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 CX3CR1P49238 355 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 CAV3P56539 151 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 LIN54Q6MZP7 749 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF627Q7L945 461 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 TMEM17Q86X19 198 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 CNEP1R1Q8N9A8 125 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 C19orf18Q8NEA5 215 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 SPTSSAQ969W0 71 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 TMEM106AQ96A25 262 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 PBOV1Q9GZY1 135 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 SLITRK2Q9H156 845 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF222Q9UK12 451 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 CARHSP1Q9Y2V2 147 aaKnown RBP7.05□□□□□ -1.28
CCDC39-201ENST00000442201 MAP1BP46821 2468 aaKnown RBP7.05□□□□□ -1.28
CCDC39-201ENST00000442201 F5H5K5 113 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 H3BSH0 61 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 PIN1P1O15428 100 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 DOK2O60496 412 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 CIDEAO60543 219 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 CD2P06729 351 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 PATE4P0C8F1 98 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 SLC2A2P11168 524 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-201ENST00000442201 ABOP16442 354 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 FOXG1P55316 489 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-201ENST00000442201 RAG2P55895 527 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF121P58317 390 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-201ENST00000442201 GUSBP1Q15486 140 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 SLC36A2Q495M3 483 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 PYDC2Q56P42 97 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 OR51A4Q8NGJ6 313 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 TCTEX1D2Q8WW35 142 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 RHOVQ96L33 236 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 SLC25A32Q9H2D1 315 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 OR51J1Q9H342 316 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 PLEKHB1Q9UF11 243 aaPredicted RBP7.05□□□□□ -1.28
CCDC39-201ENST00000442201 DHDHQ9UQ10 334 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 PLEKHA6Q9Y2H5 1048 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 A0A096LPE4 126 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 LOC107986453A0A1B0GWG9 222 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 A0A1W2PPZ6 126 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 BTBD17A6NE02 478 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 NCR1O76036 304 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 TTRP02766 147 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 ANXA2P07355 339 aaKnown RBP7.05□□□□□ -1.28
CCDC39-201ENST00000442201 OR8U8P0C7N1 319 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 SRMP19623 302 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 SLC6A9P48067 706 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 CD81P60033 236 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 TRIQKQ629K1 86 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 NAA40Q86UY6 237 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 FTMTQ8N4E7 242 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 BPIFCQ8NFQ6 507 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 OR6K3Q8NGY3 331 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 OR1F12Q8NHA8 337 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 MARS2Q96GW9 593 aaKnown RBP7.05□□□□□ -1.28
CCDC39-201ENST00000442201 OR2H1Q9GZK4 316 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 NUDT15Q9NV35 164 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 CACNA1AO00555 2505 aa7.05□□□□□ -1.28
CCDC39-201ENST00000442201 PRRC2CQ9Y520 2896 aaKnown RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 TRBV5-7A0A0A0MS05 114 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 MBD3L4A6NDZ8 208 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 MBD3L3A6NE82 208 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 MBD3L5A6NJ08 208 aaPredicted RBP7.04□□□□□ -1.28
CCDC39-201ENST00000442201 COLCA2A8K830 154 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 M0R135 149 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 P2RY10O00398 339 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 RGS11O94810 467 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF44P15621 663 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 CXCL2P19875 107 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 G0S2P27469 103 aa7.04□□□□□ -1.28
CCDC39-201ENST00000442201 DDTP30046 118 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms