RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ADAMTS17Q8TE56 1095 aa14.47□□□□□ -0.09
SEMA3B-207ENST00000441915 TLNRD1Q9H1K6 362 aa14.47□□□□□ -0.09
SEMA3B-207ENST00000441915 C1orf123Q9NWV4 160 aa14.47□□□□□ -0.09
SEMA3B-207ENST00000441915 EDARQ9UNE0 448 aa14.47□□□□□ -0.09
SEMA3B-207ENST00000441915 PIGLQ9Y2B2 252 aa14.47□□□□□ -0.09
SEMA3B-207ENST00000441915 IGHV5-10-1A0A0J9YXX1 117 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 SNAPINO95295 136 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 ONECUT2O95948 504 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 RBMXP38159 391 aaKnown RBP14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 PPA1Q15181 289 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 C10orf128Q5T292 105 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 FAM219AQ8IW50 185 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 WNT2BQ93097 391 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 SAT2Q96F10 170 aaPredicted RBP14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 ADAT1Q9BUB4 502 aaKnown RBP14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 HRH4Q9H3N8 390 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 ACKR4Q9NPB9 350 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 UQCC1Q9NVA1 299 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 PLEKHJ1Q9NW61 149 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 TINAGQ9UJW2 476 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 OR5H15A6NDH6 313 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 TAAR5O14804 337 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 IFNA2P01563 188 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 FABP1P07148 127 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 ECI1P42126 302 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 ENDOGQ14249 297 aaKnown RBP14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 TMEM200AQ86VY9 491 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 SPEM1Q8N4L4 309 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 PIGTQ969N2 578 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 DUSP23Q9BVJ7 150 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 SEC11CQ9BY50 192 aa14.46□□□□□ -0.09
SEMA3B-207ENST00000441915 NPIPA2E9PIF3 369 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 NPIPA3F8WFD2 350 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 CA11O75493 328 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 CCL7P80098 99 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 FOXRED2Q8IWF2 684 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 C10orf35Q96D05 121 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 RBM24Q9BX46 236 aaKnown RBP14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 TMEM231Q9H6L2 316 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 TAF9BQ9HBM6 251 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 PCDHGA1Q9Y5H4 931 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 EML6Q6ZMW3 1958 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 A0A087WZY1 265 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 M0R135 149 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 EIF1BO60739 113 aaKnown RBP14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 VAMP5O95183 116 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 SERPINA5P05154 406 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 S100A6P06703 90 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 PVALBP20472 110 aaPredicted RBP14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 GABRR1P24046 479 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 SWI5Q1ZZU3 235 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 MST1LQ2TV78 715 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 ZNF528Q3MIS6 628 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 PHYHD1Q5SRE7 291 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 C6orf201Q7Z4U5 140 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 SEMA6DQ8NFY4 1073 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 ZNF799Q96GE5 643 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 SMIM8Q96KF7 97 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 ZNF385AQ96PM9 386 aaKnown RBP14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 AKIRIN1Q9H9L7 192 aaPredicted RBP14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 PLEK2Q9NYT0 353 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 CACNA1EQ15878 2313 aa14.45□□□□□ -0.1
SEMA3B-207ENST00000441915 PTGER4P35408 488 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 SULF2Q8IWU5 870 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 SGPP2Q8IWX5 399 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 TMEM54Q969K7 222 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 CCDC74BQ96LY2 380 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 ZNF2Q9BSG1 426 aaPredicted RBP14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 RHOFQ9HBH0 211 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 ARID1AO14497 2285 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 IGHV3-15A0A0B4J1V0 119 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 PMS2P1A4D2B8 440 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 DHHO43323 396 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 IFNA4P05014 189 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 OTX1P32242 354 aaPredicted RBP14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 RSPO1Q2MKA7 263 aaPredicted RBP14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 IAH1Q2TAA2 248 aaPredicted RBP14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 RPL7L1Q6DKI1 246 aaKnown RBP14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 MRPL14Q6P1L8 145 aaKnown RBP14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 CBLN2Q8IUK8 224 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 NANPQ8TBE9 248 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 NABP1Q96AH0 204 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 SHDQ96IW2 340 aa14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 MCTS1Q9ULC4 181 aaKnown RBP14.44□□□□□ -0.1
SEMA3B-207ENST00000441915 HKR1P10072 659 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 ZNF84P51523 738 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 ZNF133P52736 654 aaPredicted RBP14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 RBM39Q14498 530 aaKnown RBP14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 RAET1LQ5VY80 246 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 DHRS7BQ6IAN0 325 aaPredicted RBP14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 LILRB2Q8N423 598 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 CCDC54Q8NEL0 328 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 SPTSSAQ969W0 71 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 PIGQQ9BRB3 760 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 CNTNAP3Q9BZ76 1288 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 CNTRLQ7Z7A1 2325 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 IGKV1D-8A0A087WSZ0 117 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 DHRS7CA6NNS2 312 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 LRP3O75074 770 aa14.43□□□□□ -0.1
SEMA3B-207ENST00000441915 DBHP09172 617 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms