RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 EPHA1P21709 976 aa8□□□□□ -1.13
COPB1-202ENST00000439561 RABIFP47224 123 aa8□□□□□ -1.13
COPB1-202ENST00000439561 LANCL3Q6ZV70 420 aa8□□□□□ -1.13
COPB1-202ENST00000439561 LYZL2Q7Z4W2 148 aa8□□□□□ -1.13
COPB1-202ENST00000439561 POC1AQ8NBT0 407 aa8□□□□□ -1.13
COPB1-202ENST00000439561 OR5T1Q8NG75 326 aa8□□□□□ -1.13
COPB1-202ENST00000439561 ZNF519Q8TB69 540 aa8□□□□□ -1.13
COPB1-202ENST00000439561 SLC25A43Q8WUT9 341 aaPredicted RBP8□□□□□ -1.13
COPB1-202ENST00000439561 DYRK2Q92630 601 aa8□□□□□ -1.13
COPB1-202ENST00000439561 TPSD1Q9BZJ3 242 aa8□□□□□ -1.13
COPB1-202ENST00000439561 ZNF442Q9H7R0 627 aa8□□□□□ -1.13
COPB1-202ENST00000439561 SERINC1Q9NRX5 453 aa8□□□□□ -1.13
COPB1-202ENST00000439561 METTL1Q9UBP6 276 aaKnown RBP8□□□□□ -1.13
COPB1-202ENST00000439561 IGHV5-51A0A0C4DH38 117 aa8□□□□□ -1.13
COPB1-202ENST00000439561 CXorf65A6NEN9 183 aa8□□□□□ -1.13
COPB1-202ENST00000439561 E5RGE8 158 aa8□□□□□ -1.13
COPB1-202ENST00000439561 PHOX2AO14813 284 aa8□□□□□ -1.13
COPB1-202ENST00000439561 TLX3O43711 291 aaPredicted RBP8□□□□□ -1.13
COPB1-202ENST00000439561 IGHG1P01857 330 aa8□□□□□ -1.13
COPB1-202ENST00000439561 KLK3P07288 261 aaPredicted RBP8□□□□□ -1.13
COPB1-202ENST00000439561 OR8U8P0C7N1 319 aa8□□□□□ -1.13
COPB1-202ENST00000439561 HSD11B2P80365 405 aa8□□□□□ -1.13
COPB1-202ENST00000439561 KISS1Q15726 138 aa8□□□□□ -1.13
COPB1-202ENST00000439561 NSUN5P2Q63ZY6 315 aa8□□□□□ -1.13
COPB1-202ENST00000439561 OR2T2Q6IF00 324 aa8□□□□□ -1.13
COPB1-202ENST00000439561 BSCL2Q96G97 398 aaPredicted RBP8□□□□□ -1.13
COPB1-202ENST00000439561 NIPSNAP3BQ9BS92 247 aa8□□□□□ -1.13
COPB1-202ENST00000439561 RTBDNQ9BSG5 229 aaPredicted RBP8□□□□□ -1.13
COPB1-202ENST00000439561 FAAP24Q9BTP7 215 aa8□□□□□ -1.13
COPB1-202ENST00000439561 ADAM19Q9H013 955 aa8□□□□□ -1.13
COPB1-202ENST00000439561 MTIF3Q9H2K0 278 aaKnown RBP8□□□□□ -1.13
COPB1-202ENST00000439561 GPR173Q9NS66 373 aa8□□□□□ -1.13
COPB1-202ENST00000439561 TINAGQ9UJW2 476 aa8□□□□□ -1.13
COPB1-202ENST00000439561 NSG2Q9Y328 171 aa8□□□□□ -1.13
COPB1-202ENST00000439561 WDR87Q6ZQQ6 2873 aa8□□□□□ -1.13
COPB1-202ENST00000439561 A0A087WZY1 265 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 A0A1B0GV90 55 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ZFP92A6NM28 416 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 FIGNL2A6NMB9 653 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 TNFRSF10CO14798 259 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ST8SIA3O43173 380 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 HEXBP07686 556 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 FCGR3AP08637 254 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 CD63P08962 238 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 FBP1P09467 338 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 KIR2DL1P43626 348 aaPredicted RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 MMP16P51512 607 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 TMEM50BP56557 158 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 SUPT4H1P63272 117 aaKnown RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 FOXF1Q12946 379 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 SSX2Q16385 188 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 GPR157Q5UAW9 335 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 BTNL8Q6UX41 500 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ZNF610Q8N9Z0 462 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 PTX4Q96A99 478 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 VN1R1Q9GZP7 353 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 CHST11Q9NPF2 352 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 PLEK2Q9NYT0 353 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 KLHL13Q9P2N7 655 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 PCOLCE2Q9UKZ9 415 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 PIGLQ9Y2B2 252 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 LIPGQ9Y5X9 500 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 SDK2Q58EX2 2172 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 A0A0A6YYD4 124 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 FAM24AA6NFZ4 105 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 H3BP45 60 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 HSPB6O14558 160 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 LDLRAD4O15165 306 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 SPRY1O43609 319 aaPredicted RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 SNCAP37840 140 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ALDH3B1P43353 468 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 RAB11AP62491 216 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ZNF239Q16600 458 aaKnown RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 HIST2H3PS2Q5TEC6 136 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 RNF133Q8WVZ7 376 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 GPR61Q9BZJ8 451 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 UNKLQ9H9P5 680 aaKnown RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 PLEKHA2Q9HB19 425 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 LRFN1Q9P244 771 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 PIAS3Q9Y6X2 628 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 PHF3Q92576 2039 aaKnown RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 TICRRQ7Z2Z1 1910 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 KIAA1549LQ6ZVL6 1849 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 FAM221BA6H8Z2 402 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ALG1L2C9J202 215 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ZNF587BE7ETH6 402 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 H0YL77 283 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ATXN7O15265 892 aaPredicted RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 SSSCA1O60232 199 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 SCAF4O95104 1147 aaKnown RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 SLC34A2O95436 690 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 HPNP05981 417 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 RPL23AP62750 156 aaKnown RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 FOXK1P85037 733 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 SRSF4Q08170 494 aaKnown RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 TMEM176BQ3YBM2 270 aaPredicted RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 RTL10Q7L3V2 364 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 C1QL2Q7Z5L3 287 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 LURAP1LQ8IV03 231 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ZNF695Q8IW36 515 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms