RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 MFAP5Q13361 173 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 RPUSD3Q6P087 351 aaKnown RBP11.92□□□□□ -0.5
PCNX3-202ENST00000439247 KLHL24Q6TFL4 600 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 C9orf40Q8IXQ3 194 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 ASB10Q8WXI3 467 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 MR1Q95460 341 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 LIN37Q96GY3 246 aaPredicted RBP11.92□□□□□ -0.5
PCNX3-202ENST00000439247 MESP1Q9BRJ9 268 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 ABHD14AQ9BUJ0 271 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 B3GALT5Q9Y2C3 310 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF729A6NN14 1252 aaPredicted RBP11.92□□□□□ -0.5
PCNX3-202ENST00000439247 CEACAM18A8MTB9 384 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 H3BML4 177 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 MT-ATP6P00846 226 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF17P17021 662 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 RBMXP38159 391 aaKnown RBP11.92□□□□□ -0.5
PCNX3-202ENST00000439247 EIF5AP63241 154 aaKnown RBP11.92□□□□□ -0.5
PCNX3-202ENST00000439247 CCL20P78556 96 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 NHLH2Q02577 135 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 SPNS3Q6ZMD2 512 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 PIGQQ9BRB3 760 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 GPR84Q9NQS5 396 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF581Q9P0T4 197 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 VDAC3Q9Y277 283 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 SIT1Q9Y3P8 196 aa11.92□□□□□ -0.5
PCNX3-202ENST00000439247 C10orf142B7Z368 130 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF878C9JN71 531 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 HPNP05981 417 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 PGCP20142 388 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 NOVA1P51513 510 aaKnown RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 POLR2HP52434 150 aaKnown RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 HSD17B7P56937 341 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 PLXDC2Q6UX71 529 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 FNDC9Q8TBE3 224 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 C19orf12Q9NSK7 152 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 DMRT1Q9Y5R6 373 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 IGKV1-9A0A0C4DH69 117 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 DHRS7CA6NNS2 312 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 IGLV3-19P01714 112 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 CHRM2P08172 466 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 GSTP1P09211 210 aaKnown RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 KLK2P20151 261 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 BLVRBP30043 206 aaPredicted RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 SLC6A8P48029 635 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 PLCXD2Q0VAA5 305 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 NSUN5P2Q63ZY6 315 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF574Q6ZN55 896 aaPredicted RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 DTX1Q86Y01 620 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 DMRTC2Q8IXT2 367 aaPredicted RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 IER2Q9BTL4 223 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 LIME1Q9H400 295 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 KCNJ16Q9NPI9 418 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 HDGFL3Q9Y3E1 203 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 TECTAO75443 2155 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 DDAH2O95865 285 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 MBPP02686 304 aaPredicted RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 DANCRP0C864 163 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 BIDP55957 195 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 CARD17Q5XLA6 110 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 TMEM182Q6ZP80 229 aaPredicted RBP11.91□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF248Q8NDW4 579 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 OR10H5Q8NGA6 315 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 OR8B12Q8NGG6 310 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF721Q8TF20 911 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 SGK3Q96BR1 496 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 TGM7Q96PF1 710 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 TUBA4BQ9H853 241 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 ANAPC10Q9UM13 185 aa11.91□□□□□ -0.5
PCNX3-202ENST00000439247 FRG2CA6NGY1 282 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 FTCDNL1E5RQL4 147 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 WRBO00258 174 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 SLC34A2O95436 690 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 CXCL1P09341 107 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 GFERP55789 205 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 FAM3AP98173 230 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 CHRFAM7AQ494W8 412 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 KIAA0895LQ68EN5 471 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF529Q6P280 563 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 HEPN1Q6WQI6 88 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 SHISA6Q6ZSJ9 500 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 C6orf201Q7Z4U5 140 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 KCNG3Q8TAE7 436 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 FAM213BQ8TBF2 198 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 ADAMTS18Q8TE60 1221 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 THAP3Q8WTV1 239 aaPredicted RBP11.9□□□□□ -0.5
PCNX3-202ENST00000439247 CLDN23Q96B33 292 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 ELL3Q9HB65 397 aaPredicted RBP11.9□□□□□ -0.5
PCNX3-202ENST00000439247 LANCL2Q9NS86 450 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 SOHLH2Q9NX45 425 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 DOK5Q9P104 306 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 MCTS1Q9ULC4 181 aaKnown RBP11.9□□□□□ -0.5
PCNX3-202ENST00000439247 ZDHHC8Q9ULC8 765 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 MEMO1Q9Y316 297 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 POMT1Q9Y6A1 747 aa11.9□□□□□ -0.5
PCNX3-202ENST00000439247 THADAQ6YHU6 1953 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms