RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 KCNAB3O43448 404 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 CD276Q5ZPR3 534 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
LRCH3-206ENST00000438796 VN1R1Q9GZP7 353 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 OR2D2Q9H210 308 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 SLC25A35Q3KQZ1 300 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 COMMD1Q8N668 190 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 IL36GQ9NZH8 169 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 RNASEK-C17orf49H0YIS7 233 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 F2RL2O00254 374 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 ADAM20O43506 726 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 PTBP3O95758 552 aaKnown RBP12.34□□□□□ -0.43
LRCH3-206ENST00000438796 OR10D3Q8NH80 312 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 FAAP24Q9BTP7 215 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 MYO7AQ13402 2215 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 A0A1W2PNV4 684 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 CBY3A6NI87 242 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 AQP6Q13520 282 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 TMEM211Q6ICI0 200 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 TMEM88Q6PEY1 159 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 THSD4Q6ZMP0 1018 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 BHLHA15Q7RTS1 189 aaPredicted RBP12.34□□□□□ -0.43
LRCH3-206ENST00000438796 DND1Q8IYX4 353 aaKnown RBP12.34□□□□□ -0.43
LRCH3-206ENST00000438796 JAM3Q9BX67 310 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 SLC25A37Q9NYZ2 338 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 RTN4IP1Q8WWV3 396 aaPredicted RBP12.34□□□□□ -0.43
LRCH3-206ENST00000438796 SMIM19Q96E16 107 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 PDFQ9HBH1 243 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 NIT2Q9NQR4 276 aa12.34□□□□□ -0.43
LRCH3-206ENST00000438796 RAF1P04049 648 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 CD3EP07766 207 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 FAM53BQ14153 422 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 PRSS41Q7RTY9 318 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 FAM122BQ7Z309 247 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 OR2M3Q8NG83 312 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 SPNS1Q9H2V7 528 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 SERGEFQ9UGK8 458 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 M0R296 226 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 RER1O15258 196 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 FBP1P09467 338 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 GALNSP34059 522 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 GNG3P63215 75 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 NAAAQ02083 359 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 RNPS1Q15287 305 aaKnown RBP12.33□□□□□ -0.44
LRCH3-206ENST00000438796 VWA1Q6PCB0 445 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 ZNF793Q6ZN11 406 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 CT55Q8WUE5 264 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 TEX101Q9BY14 249 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 ERRFI1Q9UJM3 462 aaPredicted RBP12.33□□□□□ -0.44
LRCH3-206ENST00000438796 SPTY2D1-AS1A0A0U1RR47 76 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 LGALS7P47929 136 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 TMEM97Q5BJF2 176 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 RBPMS2Q6ZRY4 209 aaKnown RBP12.33□□□□□ -0.44
LRCH3-206ENST00000438796 DPH3Q96FX2 82 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 AMMECR1Q9Y4X0 333 aaPredicted RBP12.33□□□□□ -0.44
LRCH3-206ENST00000438796 MTCH2Q9Y6C9 303 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 GPX5O75715 221 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 MGPP08493 103 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 OR4A8P0C604 315 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 SSPNQ14714 243 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 ZNF141Q15928 474 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 OR2G2Q8NGZ5 317 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 MVB12AQ96EY5 273 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 KLK11Q9UBX7 282 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 YBX2Q9Y2T7 364 aaKnown RBP12.33□□□□□ -0.44
LRCH3-206ENST00000438796 TAAR5O14804 337 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 SMUG1Q53HV7 270 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 OR5D13Q8NGL4 314 aa12.33□□□□□ -0.44
LRCH3-206ENST00000438796 IGHV3OR15-7A0A075B7D8 119 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 NHLH1Q02575 133 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 NHLH2Q02577 135 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 ACER2Q5QJU3 275 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 C2orf50Q96LR7 162 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 WDR61Q9GZS3 305 aaKnown RBP12.32□□□□□ -0.44
LRCH3-206ENST00000438796 AP5S1Q9NUS5 200 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 LAMP3Q9UQV4 416 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 LOC102724200A0A096LPH7 203 aaPredicted RBP12.32□□□□□ -0.44
LRCH3-206ENST00000438796 GLULP15104 373 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 NME1P15531 152 aaKnown RBP12.32□□□□□ -0.44
LRCH3-206ENST00000438796 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
LRCH3-206ENST00000438796 CHRDL1Q9BU40 450 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 RNF2Q99496 336 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 G6PCP35575 357 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 LPAR6P43657 344 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 SEBOXQ9HB31 216 aaPredicted RBP12.32□□□□□ -0.44
LRCH3-206ENST00000438796 IFITM5A6NNB3 132 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 PLAURQ03405 335 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 GPNMBQ14956 572 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 DGAT2L7PQ6IED9 249 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 MYPOPQ86VE0 399 aaPredicted RBP12.32□□□□□ -0.44
LRCH3-206ENST00000438796 CALHM3Q86XJ0 350 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 PIGMQ9H3S5 423 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 AKR7A2O43488 359 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 GIPP09681 153 aaPredicted RBP12.32□□□□□ -0.44
LRCH3-206ENST00000438796 TMEM215Q68D42 235 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 MCHR2Q969V1 340 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 RASL11BQ9BPW5 248 aa12.32□□□□□ -0.44
LRCH3-206ENST00000438796 YTHDF2Q9Y5A9 579 aaKnown RBP12.32□□□□□ -0.44
LRCH3-206ENST00000438796 THBS4P35443 961 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms