RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 A0A1B0GUH1 482 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 OR5B21A6NL26 309 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 CD300LBA8K4G0 201 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 DISC1C4P0D8 188 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 K7EM74 188 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 PRRG2O14669 202 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 WISP2O76076 250 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 IGKV3-15P01624 115 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 CCL2P13500 99 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 SERPINA2P20848 420 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 PRDX4Q13162 271 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 TRAPPC6BQ86SZ2 158 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 CD163Q86VB7 1156 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 WBP1Q96G27 269 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 USB1Q9BQ65 265 aaKnown RBP13.26□□□□□ -0.29
SGCE-205ENST00000437425 BANF2Q9H503 90 aa13.26□□□□□ -0.29
SGCE-205ENST00000437425 GPN1Q9HCN4 374 aaPredicted RBP13.26□□□□□ -0.29
SGCE-205ENST00000437425 ZNF850A8MQ14 1090 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 MFNGO00587 321 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 CD3DP04234 171 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 IL5P05113 134 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 GNB3P16520 340 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 CEACAM8P31997 349 aaPredicted RBP13.25□□□□□ -0.29
SGCE-205ENST00000437425 WNT5AP41221 380 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 FOXF2Q12947 444 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 C3orf36Q3SXR2 165 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 CD276Q5ZPR3 534 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 SEM1Q6ZVN7 128 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 BHLHA15Q7RTS1 189 aaPredicted RBP13.25□□□□□ -0.29
SGCE-205ENST00000437425 RNF144BQ7Z419 303 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 C1QL2Q7Z5L3 287 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 TMEM200AQ86VY9 491 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 Q96M66 194 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 PRRT1Q99946 306 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 OCSTAMPQ9BR26 566 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 NICN1Q9BSH3 213 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 MED28Q9H204 178 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 GHITMQ9H3K2 345 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 PIGMQ9H3S5 423 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 RHOFQ9HBH0 211 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 NPDC1Q9NQX5 325 aaPredicted RBP13.25□□□□□ -0.29
SGCE-205ENST00000437425 SLC2A8Q9NY64 477 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 HSF4Q9ULV5 492 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 ANAPC10Q9UM13 185 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 ACACBO00763 2458 aa13.25□□□□□ -0.29
SGCE-205ENST00000437425 A0A0A6YYD4 124 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 A0A0A6YYJ9 748 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 PQLC2LA1A4F0 135 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A10PA6NDY2 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A18PA6NE21 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A16PA6NEW6 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A20PA6NIJ5 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A8PA6NJQ4 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A7PA6NKC0 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FOXI3A8MTJ6 420 aaPredicted RBP13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A22PA8MWA6 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A12PA8MX19 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A5PA8MXJ8 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A23PA8MXZ1 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 SOCS1O15524 211 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 NGFP01138 241 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A15PP0C7V4 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A13PP0C7W8 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A14PP0C7W9 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM90A24PP0C7X0 464 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 RAC2P15153 192 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 NAT1P18440 290 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 BLVRBP30043 206 aaPredicted RBP13.24□□□□□ -0.29
SGCE-205ENST00000437425 PMELP40967 661 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 RAD52P43351 418 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 IDH3GP51553 393 aaPredicted RBP13.24□□□□□ -0.29
SGCE-205ENST00000437425 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 RNASE10Q5GAN6 216 aaKnown RBP13.24□□□□□ -0.29
SGCE-205ENST00000437425 MKXQ8IYA7 352 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 TCTE3Q8IZS6 198 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 ZNF610Q8N9Z0 462 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 Q8NFD4 153 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 EXTL1Q92935 676 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 MS4A3Q96HJ5 214 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 TRAF4Q9BUZ4 470 aaPredicted RBP13.24□□□□□ -0.29
SGCE-205ENST00000437425 OR51J1Q9H342 316 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 ZMAT3Q9HA38 289 aaKnown RBP13.24□□□□□ -0.29
SGCE-205ENST00000437425 FAM215AQ9Y5M1 114 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 DOCK7Q96N67 2140 aa13.24□□□□□ -0.29
SGCE-205ENST00000437425 IGKV1-27A0A075B6S5 117 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 OR5H1A6NKK0 313 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 SNRPGP15A8MWD9 76 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 SMPD2O60906 423 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 HTR3BO95264 441 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 OPRM1P35372 400 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 TDGF1P3P51864 188 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 TMEM50BP56557 158 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 PPP1CBP62140 327 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 RBPJQ06330 500 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 ARFRP1Q13795 201 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 PLAC9Q5JTB6 97 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 SSX8Q7RTT4 187 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 CXorf67Q86X51 503 aaPredicted RBP13.23□□□□□ -0.29
SGCE-205ENST00000437425 ZNF573Q86YE8 665 aa13.23□□□□□ -0.29
SGCE-205ENST00000437425 OSR2Q8N2R0 312 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms