RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ATP1B3P54709 279 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 SCGB2B2Q4G0G5 96 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 ATPAF1Q5TC12 328 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-216ENST00000437340 ZDHHC22Q8N966 263 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 OR1K1Q8NGR3 316 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 ST8SIA4Q92187 359 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 Q96M66 194 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 OR2A7Q96R45 310 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 REPIN1Q9BWE0 567 aaKnown RBP22.26■■□□□ 1.15
CPNE1-216ENST00000437340 CHST6Q9GZX3 395 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 C5orf49A4QMS7 147 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 ZNF503-AS2A6NEH8 195 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 SERPINA5P05154 406 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 OR4E1P0C645 316 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 NKPD1Q17RQ9 610 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 C4orf46Q504U0 113 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 MUC20Q8N307 709 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-216ENST00000437340 OR11H4Q8NGC9 324 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 OR2T35Q8NGX2 323 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 OR4K15Q8NH41 348 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 SNAPC3Q92966 411 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 PECRQ9BY49 303 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 C12orf49Q9H741 205 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 CLCF1Q9UBD9 225 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 KCNMB2Q9Y691 235 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 CEP295Q9C0D2 2601 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 PIEZO1Q92508 2521 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 APC2O95996 2303 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 AQP7O14520 342 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 IL18BPO95998 194 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 IFNA6P05013 189 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 RAP2BP61225 183 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 MALLQ13021 153 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 ARFRP1Q13795 201 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 RSU1Q15404 277 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 VAX1Q5SQQ9 334 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 P4HA3Q7Z4N8 544 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 NANOS1Q8WY41 292 aaKnown RBP22.25■■□□□ 1.15
CPNE1-216ENST00000437340 POM121L2Q96KW2 1035 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 FAM210AQ96ND0 272 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 CA10Q9NS85 328 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 PIPOXQ9P0Z9 390 aa22.25■■□□□ 1.15
CPNE1-216ENST00000437340 H3BUI4 141 aa22.24■■□□□ 1.15
CPNE1-216ENST00000437340 CSTBP04080 98 aaKnown RBP22.24■■□□□ 1.15
CPNE1-216ENST00000437340 CSN2P05814 226 aa22.24■■□□□ 1.15
CPNE1-216ENST00000437340 GK2Q14410 553 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-216ENST00000437340 MYO7BQ6PIF6 2116 aa22.24■■□□□ 1.15
CPNE1-216ENST00000437340 PXT1Q8NFP0 134 aa22.24■■□□□ 1.15
CPNE1-216ENST00000437340 OR2AK2Q8NG84 335 aa22.24■■□□□ 1.15
CPNE1-216ENST00000437340 BCL2L2Q92843 193 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-216ENST00000437340 OPA3Q9H6K4 179 aa22.24■■□□□ 1.15
CPNE1-216ENST00000437340 IL36GQ9NZH8 169 aa22.24■■□□□ 1.15
CPNE1-216ENST00000437340 EIF3KQ9UBQ5 218 aaKnown RBP22.24■■□□□ 1.15
CPNE1-216ENST00000437340 FRYQ5TBA9 3013 aa22.24■■□□□ 1.15
CPNE1-216ENST00000437340 PLCXD3Q63HM9 321 aa22.23■■□□□ 1.15
CPNE1-216ENST00000437340 MOB3CQ70IA8 216 aa22.23■■□□□ 1.15
CPNE1-216ENST00000437340 ARRDC1Q8N5I2 433 aa22.23■■□□□ 1.15
CPNE1-216ENST00000437340 GRPEL2Q8TAA5 225 aa22.23■■□□□ 1.15
CPNE1-216ENST00000437340 ASB13Q8WXK3 278 aa22.23■■□□□ 1.15
CPNE1-216ENST00000437340 FBXW5Q969U6 566 aa22.23■■□□□ 1.15
CPNE1-216ENST00000437340 CCNOP22674 350 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 PRSS12P56730 875 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 MPPED2Q15777 294 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 HOGA1Q86XE5 327 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 PIGCQ92535 297 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 MRPS24Q96EL2 167 aaKnown RBP22.22■■□□□ 1.15
CPNE1-216ENST00000437340 RADILQ96JH8 1075 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 PCDHB16Q9NRJ7 776 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 SSUH2Q9Y2M2 353 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 G3V3Q6 166 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 AKR7A2O43488 359 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 GSTT2P0CG29 244 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 MICBQ29980 383 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 TMED4Q7Z7H5 227 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 VSIG4Q9Y279 399 aa22.22■■□□□ 1.15
CPNE1-216ENST00000437340 TNRC6AQ8NDV7 1962 aaKnown RBP22.22■■□□□ 1.15
CPNE1-216ENST00000437340 LAMA5O15230 3695 aa22.21■■□□□ 1.15
CPNE1-216ENST00000437340 SPRY1O43609 319 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-216ENST00000437340 SNAPC5O75971 98 aa22.21■■□□□ 1.15
CPNE1-216ENST00000437340 HTR3BO95264 441 aa22.21■■□□□ 1.15
CPNE1-216ENST00000437340 FAHD2BQ6P2I3 314 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-216ENST00000437340 SLC25A42Q86VD7 318 aa22.21■■□□□ 1.15
CPNE1-216ENST00000437340 FAHD2AQ96GK7 314 aa22.21■■□□□ 1.15
CPNE1-216ENST00000437340 HSF4Q9ULV5 492 aa22.21■■□□□ 1.15
CPNE1-216ENST00000437340 ANGPTL7O43827 346 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 PMP2P02689 132 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 APLNRP35414 380 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 SNRPD2P62316 118 aaKnown RBP22.2■■□□□ 1.14
CPNE1-216ENST00000437340 PDZK1IP1Q13113 114 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 SPACA3Q8IXA5 215 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 CSNK2A3Q8NEV1 391 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 MRGPRFQ96AM1 343 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 SARAFQ96BY9 339 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 POM121Q96HA1 1249 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 GPR137Q96N19 417 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 CHIAQ9BZP6 476 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 ARHGAP21Q5T5U3 1957 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 ACACAQ13085 2346 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 CCL2P13500 99 aa22.2■■□□□ 1.14
CPNE1-216ENST00000437340 HIKESHIQ53FT3 197 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms