RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PADI1Q9ULC6 663 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 GPR34Q9UPC5 381 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 MKRN2OSH3BPM6 223 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 SNCGO76070 127 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 IL18BPO95998 194 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 OR5H8P0DN80 308 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 RND3P61587 244 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 CDK3Q00526 305 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 RPL18Q07020 188 aaKnown RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 PLGLAQ15195 96 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF776Q68DI1 518 aaPredicted RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 SSX7Q7RTT5 188 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 CPEB2Q7Z5Q1 589 aaKnown RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 ARRDC3Q96B67 414 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 SLC22A18Q96BI1 424 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 MRGPRX3Q96LB0 322 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 OR8B4Q96RC9 309 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 ADAM19Q9H013 955 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 TMEM14AQ9Y6G1 99 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 C20orf202A1L168 122 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 RBFOX3A6NFN3 312 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 DLEU1O43261 78 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 TCF21O43680 179 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 IFNA1P01562 189 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 CTHP32929 405 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 C1QL3Q5VWW1 255 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 METRNLQ641Q3 311 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 MMABQ96EY8 250 aaPredicted RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 HHLA2Q9UM44 414 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 LAMTOR5O43504 91 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 VSIG8P0DPA2 414 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 FBLP22087 321 aaKnown RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 RPS4Y1P22090 263 aaKnown RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 MESP2Q0VG99 397 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 LPAL2Q16609 132 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 OR5D18Q8NGL1 313 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 OTOSQ8NHW6 89 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 RTBDNQ9BSG5 229 aaPredicted RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 SLC5A6Q9Y289 635 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 MRPS2Q9Y399 296 aaKnown RBP6.62□□□□□ -1.35
CPSF6-202ENST00000435070 Q9Y3F1 56 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 MED12Q93074 2177 aa6.62□□□□□ -1.35
CPSF6-202ENST00000435070 HRKO00198 91 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 TGOLN2O43493 480 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 FUT3P21217 361 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 APOBEC1P41238 236 aaKnown RBP6.61□□□□□ -1.35
CPSF6-202ENST00000435070 FASLGP48023 281 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 MRPL49Q13405 166 aaKnown RBP6.61□□□□□ -1.35
CPSF6-202ENST00000435070 DNM1P34Q6PK57 102 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 SLC22A25Q6T423 547 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 DGAT2L6Q6ZPD8 337 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 HCFC1R1Q9NWW0 138 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 FOXD3Q9UJU5 478 aaPredicted RBP6.61□□□□□ -1.35
CPSF6-202ENST00000435070 INSL6Q9Y581 213 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 A0A087WUJ7 227 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 OTX2P32243 289 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 LDLRAD1Q5T700 205 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 VN1R4Q7Z5H5 301 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 FAM185AQ8N0U4 392 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF596Q8TC21 504 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 TMEM37Q8WXS4 190 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 HAS2Q92819 552 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 TOMM40LQ969M1 308 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 NOL4LQ96MY1 436 aaPredicted RBP6.61□□□□□ -1.35
CPSF6-202ENST00000435070 TSPAN32Q96QS1 320 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 CDCA3Q99618 268 aaPredicted RBP6.61□□□□□ -1.35
CPSF6-202ENST00000435070 ELOVL1Q9BW60 279 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 STARD5Q9NSY2 213 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 SLC45A1Q9Y2W3 748 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 WSB1Q9Y6I7 421 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 SPINT1O43278 529 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 KAT7O95251 611 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 ADH1BP00325 375 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 HSD11B2P80365 405 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF100Q8IYN0 542 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 OR2G3Q8NGZ4 309 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 STT3BQ8TCJ2 826 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 IRF7Q92985 503 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 KCNIP2Q9NS61 270 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 TMED3Q9Y3Q3 217 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 SHANK1Q9Y566 2161 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 HTTP42858 3142 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 DHRS7CA6NNS2 312 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 TFPI2P48307 235 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 RAB11AP62491 216 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 HTD2P86397 168 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 PAX5Q02548 391 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 TSPO2Q5TGU0 170 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 SGPP2Q8IWX5 399 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 PRR18Q8N4B5 295 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 OR13G1Q8NGZ3 307 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 NUP210Q8TEM1 1887 aaPredicted RBP6.61□□□□□ -1.35
CPSF6-202ENST00000435070 KLHDC3Q9BQ90 382 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 ABHD6Q9BV23 337 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 ZNF701Q9NV72 531 aaPredicted RBP6.61□□□□□ -1.35
CPSF6-202ENST00000435070 APBB3O95704 486 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 CD33P20138 364 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 INSM1Q01101 510 aaPredicted RBP6.61□□□□□ -1.35
CPSF6-202ENST00000435070 PMS2P11Q13670 270 aa6.61□□□□□ -1.35
CPSF6-202ENST00000435070 PPA1Q15181 289 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms