RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 OR6C6A6NF89 314 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 ZNF716A6NP11 495 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 PATE3B3GLJ2 98 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 CXCL13O43927 109 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 HTR3BO95264 441 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 LCATP04180 440 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 CTSDP07339 412 aaPredicted RBP9.1□□□□□ -0.95
CD44-210ENST00000434472 DBHP09172 617 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 DTYMKP23919 212 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 OTX2P32243 289 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 RBMXP38159 391 aaKnown RBP9.1□□□□□ -0.95
CD44-210ENST00000434472 RSU1Q15404 277 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 BEX5Q5H9J7 111 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 AADACL3Q5VUY0 350 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 GALNTL5Q7Z4T8 443 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 GLRX5Q86SX6 157 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 YRDCQ86U90 279 aaKnown RBP9.1□□□□□ -0.95
CD44-210ENST00000434472 BORCS8Q96FH0 119 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 ZNF75AQ96N20 296 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 RNF126Q9BV68 326 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 C1QTNF6Q9BXI9 259 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 STRADBQ9C0K7 418 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 C1orf123Q9NWV4 160 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 TAS2R3Q9NYW6 316 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 TCFL5Q9UL49 500 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 XIRP2A4UGR9 3374 aa9.1□□□□□ -0.95
CD44-210ENST00000434472 CCDC187A0A096LP49 1063 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 LGALS8O00214 317 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 TAAR5O14804 337 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 FGF16O43320 207 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 IFNA2P01563 188 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 RBP2P50120 134 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 SUPT4H1P63272 117 aaKnown RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 STK11Q15831 433 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 SNAI3Q3KNW1 292 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ANKRD55Q3KP44 614 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 CCDC157Q569K6 752 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ACER2Q5QJU3 275 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ZNF468Q5VIY5 522 aaPredicted RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 TMEM42Q69YG0 159 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ZNF774Q6NX45 483 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 TFAP2EQ6VUC0 442 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 GGNQ86UU5 652 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 BAP18Q8IXM2 172 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 POC1AQ8NBT0 407 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 SLC30A7Q8NEW0 376 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 MARC2Q969Z3 335 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 CPNE4Q96A23 557 aaPredicted RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 TMEM45BQ96B21 275 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ADGRG7Q96K78 797 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 AQP10Q96PS8 301 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 FOXB1Q99853 325 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 FAM117AQ9C073 453 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 LDAHQ9H6V9 325 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 BCO1Q9HAY6 547 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 BARX1Q9HBU1 254 aaPredicted RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 CRLF2Q9HC73 371 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ZNF701Q9NV72 531 aaPredicted RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 ATPIF1Q9UII2 106 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 SLC7A11Q9UPY5 501 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 PI4KAP42356 2102 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 LRRC3CA6NJW4 275 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 SDCBPO00560 298 aaPredicted RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 XRCC2O43543 280 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 CYTIPO60759 359 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 FARS2O95363 451 aaKnown RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 IFNA21P01568 189 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ZNF883P0CG24 379 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ZNF32P17041 273 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 TCN2P20062 427 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 GLRA1P23415 457 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 GABRR1P24046 479 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 PMELP40967 661 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 HTR5AP47898 357 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 CYB561P49447 251 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 FUT6P51993 359 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 AIMP2Q13155 320 aaKnown RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 NRN1LQ496H8 165 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 FAM74A1Q5RGS3 127 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 C1orf210Q8IVY1 113 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 SGPP2Q8IWX5 399 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ESX1Q8N693 406 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 ZSCAN4Q8NAM6 433 aaPredicted RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 OR10D3Q8NH80 312 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 LHFPL5Q8TAF8 219 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 CT55Q8WUE5 264 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 RNF141Q8WVD5 230 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 OR2H1Q9GZK4 316 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 GPR35Q9HC97 309 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 NECAP2Q9NVZ3 263 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 IL36GQ9NZH8 169 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 BOKQ9UMX3 212 aaPredicted RBP9.09□□□□□ -0.95
CD44-210ENST00000434472 LOXL2Q9Y4K0 774 aa9.09□□□□□ -0.95
CD44-210ENST00000434472 FAM230AA0A1W2PPH8 454 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 ADAP1O75689 374 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 TRAPPC6AO75865 159 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 NRASP01111 189 aa9.08□□□□□ -0.96
CD44-210ENST00000434472 RPS2P15880 293 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms