RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 METTL9Q9H1A3 318 aa11.17□□□□□ -0.62
DDX56-204ENST00000431640 BCO1Q9HAY6 547 aa11.17□□□□□ -0.62
DDX56-204ENST00000431640 OPN4Q9UHM6 478 aa11.17□□□□□ -0.62
DDX56-204ENST00000431640 FAM166BA8MTA8 275 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 ZNF587BE7ETH6 402 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 L7N2F9 121 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 M0R233 179 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 PDGFAP04085 211 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 CSN2P05814 226 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 MMP7P09237 267 aaPredicted RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 COX5BP10606 129 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 BLVRBP30043 206 aaPredicted RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 RBP2P50120 134 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 CCL11P51671 97 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 TAS2R46P59540 309 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 UBE2MP61081 183 aaKnown RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 PPIAP62937 165 aaKnown RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 OR52W1Q6IF63 320 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 CRIP3Q6Q6R5 217 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 LYG2Q86SG7 212 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 HOGA1Q86XE5 327 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 TERB2Q8NHR7 220 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 ZCCHC14Q8WYQ9 949 aaKnown RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 ARHGAP5-AS1Q96IT6 56 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 PRDM14Q9GZV8 571 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 HEXA-AS1Q9H8Q6 139 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 SLC7A11Q9UPY5 501 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 FOXI3A8MTJ6 420 aaPredicted RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 MCRIP1C9JLW8 97 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 K7EM74 188 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 NRASP01111 189 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 IL2RAP01589 272 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 CSTBP04080 98 aaKnown RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 CELA3AP09093 270 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 TMEM225BP0DP42 221 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 HLA-GP17693 338 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 SERPINA2P20848 420 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 CD34P28906 385 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 FUT6P51993 359 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 ATP1B3P54709 279 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 H2BFSP57053 126 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 SEC61A1P61619 476 aaKnown RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 ARF1P84077 181 aaKnown RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 SRSF4Q08170 494 aaKnown RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 DHRS2Q13268 280 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 OPCMLQ14982 345 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 GRK1Q15835 563 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 SFRP5Q5T4F7 317 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 TMEM42Q69YG0 159 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 ASCL4Q6XD76 172 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 C1QL2Q7Z5L3 287 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 MCEMP1Q8IX19 187 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 ZFP62Q8NB50 900 aaPredicted RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 NPRL2Q8WTW4 380 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 PIGTQ969N2 578 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 MRPS24Q96EL2 167 aaKnown RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 BORCS8Q96FH0 119 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 POM121Q96HA1 1249 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 DPCDQ9BVM2 203 aaPredicted RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 C1QTNF5Q9BXJ0 243 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 PECRQ9BY49 303 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 SLC6A15Q9H2J7 730 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 ELL3Q9HB65 397 aaPredicted RBP11.16□□□□□ -0.62
DDX56-204ENST00000431640 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 GPR173Q9NS66 373 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 SLC7A10Q9NS82 523 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 VSIG4Q9Y279 399 aa11.16□□□□□ -0.62
DDX56-204ENST00000431640 PTPRQQ9UMZ3 2332 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 PMP2P02689 132 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 PATE4P0C8F1 98 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 ZNF35P13682 527 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 ZBTB25P24278 435 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 AGTR1P30556 359 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 ARR3P36575 388 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 RFC3P40938 356 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 OR3A3P47888 321 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 OR3A2P47893 321 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 IL13RA1P78552 427 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 FAM3AP98173 230 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 RSU1Q15404 277 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 PABPC1L2AQ5JQF8 200 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 PLXDC2Q6UX71 529 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 DPPA2Q7Z7J5 298 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 TUSC5Q8IXB3 177 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 OR5H2Q8NGV7 314 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 OR2AE1Q8NHA4 323 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 SPSB4Q96A44 273 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 APH1AQ96BI3 265 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 PHB2Q99623 299 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 CALHM2Q9HA72 323 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 UBQLN2Q9UHD9 624 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 MAB21L2Q9Y586 359 aa11.15□□□□□ -0.62
DDX56-204ENST00000431640 ITPR1Q14643 2758 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 ZNF816-ZNF321PA0A0X1KG74 233 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 A0A1W2PP11 408 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 C9orf170A2RU37 121 aa11.14□□□□□ -0.63
DDX56-204ENST00000431640 ANKRD34BA5PLL1 514 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms