RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MEGF9Q9H1U4 602 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 CLN8Q9UBY8 286 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 HSF4Q9ULV5 492 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 C14orf166Q9Y224 244 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 PPIAL4AQ9Y536 164 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 LRP12Q9Y561 859 aa7.85□□□□□ -1.15
CDC42BPA-206ENST00000429440 COL4A6Q14031 1691 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 C1QL1O75973 258 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 NTN1O95631 604 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 TYMSP04818 313 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 CSN2P05814 226 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 TCN2P20062 427 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 MSR1P21757 451 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 CTRLP40313 264 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 LGALS7P47929 136 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 BIDP55957 195 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 RPS24P62847 133 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 GNB2P62879 340 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 UNQ5815/PRO19632Q6UWF5 114 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 TMEM255BQ8WV15 326 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 WBP2Q969T9 261 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 FGGYQ96C11 551 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 DCBLD2Q96PD2 775 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 KLHDC3Q9BQ90 382 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 ALG12Q9BV10 488 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 VN1R3Q9BXE9 311 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 TTTY10Q9BZA0 68 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 KLHL28Q9NXS3 571 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 TRAV8-7A0A075B6U6 113 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 C1QTNF3-AMACRE9PGA6 284 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 GALR2O43603 387 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF217O75362 1048 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 TIAF1O95411 115 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 SEMA4FO95754 770 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 F11P03951 625 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 MAS1P04201 325 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 ANOS1P23352 680 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 CCL20P78556 96 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 BSXQ3C1V8 233 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 GPR157Q5UAW9 335 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 TMEM225Q6GV28 225 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 FDX2Q6P4F2 183 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 FAM151BQ6UXP7 276 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZNF627Q7L945 461 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 CENPVQ7Z7K6 275 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 SGPP2Q8IWX5 399 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 CISD2Q8N5K1 135 aaKnown RBP7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 TMEM156Q8N614 296 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 OR10S1Q8NGN2 331 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 TMEM37Q8WXS4 190 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 RNF166Q96A37 237 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 ARRDC3Q96B67 414 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 SLC35G5Q96KT7 338 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 SMIM3Q9BZL3 60 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 SDF2L1Q9HCN8 221 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 LAMP3Q9UQV4 416 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 LIPGQ9Y5X9 500 aa7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 ZFP37Q9Y6Q3 630 aaPredicted RBP7.84□□□□□ -1.15
CDC42BPA-206ENST00000429440 THY1P04216 161 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 TACSTD2P09758 323 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 CTSAP10619 480 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 MPLP40238 635 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 KHKP50053 298 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 HNRNPA3P51991 378 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF92Q03936 586 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZFP36L1Q07352 338 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 VAMP3Q15836 100 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF684Q5T5D7 378 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 SAMD13Q5VXD3 122 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 METTL27Q8N6F8 245 aaPredicted RBP7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF519Q8TB69 540 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 ERGIC1Q969X5 290 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 EID2BQ96D98 161 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 SCGB3A2Q96PL1 93 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 Q9N2K0 584 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 PNO1Q9NRX1 252 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 FBXO34Q9NWN3 711 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 TUBD1Q9UJT1 453 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 GPR132Q9UNW8 380 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 GJE1A6NN92 205 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 TOX4O94842 621 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 KLK1P06870 262 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 SELPP16109 830 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 HMGA1P17096 107 aaKnown RBP7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 HTD2P86397 168 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 PMPCAQ10713 525 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 SLC17A1Q14916 467 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 NFATC4Q14934 902 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 MLC1Q15049 377 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 C9orf50Q5SZB4 431 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 SLC8B1Q6J4K2 584 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 NIT1Q86X76 327 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZNF595Q8IYB9 648 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 IL22RA1Q8N6P7 574 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 NPEPL1Q8NDH3 523 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 OR51G1Q8NGK1 321 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 FAM174AQ8TBP5 190 aa7.83□□□□□ -1.16
CDC42BPA-206ENST00000429440 ZMYND19Q96E35 227 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms