RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CD1AP06126 327 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 DBHP09172 617 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 PNLIPP16233 465 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 SRYQ05066 204 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 TSC22D1Q15714 1073 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 CSRP2Q16527 193 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 PLEKHN1Q494U1 663 aaPredicted RBP7.13□□□□□ -1.27
HPS4-205ENST00000429411 LY6G6FQ5SQ64 297 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 C6orf201Q7Z4U5 140 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 NAXDQ8IW45 347 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 SULF2Q8IWU5 870 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 SVBPQ8N300 66 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 KCNRGQ8N5I3 272 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 OR8B12Q8NGG6 310 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 TERB2Q8NHR7 220 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 NUBPLQ8TB37 319 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 ZNF519Q8TB69 540 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 ASB10Q8WXI3 467 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 HDHD3Q9BSH5 251 aaPredicted RBP7.13□□□□□ -1.27
HPS4-205ENST00000429411 AKIRIN1Q9H9L7 192 aaPredicted RBP7.13□□□□□ -1.27
HPS4-205ENST00000429411 RPS10P5Q9NQ39 176 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 NXT1Q9UKK6 140 aaKnown RBP7.13□□□□□ -1.27
HPS4-205ENST00000429411 PIGLQ9Y2B2 252 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 MEMO1Q9Y316 297 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 PTPRQQ9UMZ3 2332 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 TMEM200CA6NKL6 621 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 DXOO77932 396 aaKnown RBP7.13□□□□□ -1.27
HPS4-205ENST00000429411 CELA2AP08217 269 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 APOBEC1P41238 236 aaKnown RBP7.13□□□□□ -1.27
HPS4-205ENST00000429411 CDC34P49427 236 aaPredicted RBP7.13□□□□□ -1.27
HPS4-205ENST00000429411 IGLV3-21P80748 117 aaPredicted RBP7.13□□□□□ -1.27
HPS4-205ENST00000429411 UNC119Q13432 240 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 HNF4GQ14541 408 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 ASPHD2Q6ICH7 369 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 FDX2Q6P4F2 183 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 TUSC5Q8IXB3 177 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 HSD17B11Q8NBQ5 300 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 BHLHE23Q8NDY6 225 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 CLDN23Q96B33 292 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 CCDC74BQ96LY2 380 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 KCNK17Q96T54 332 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 ULBP2Q9BZM5 246 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 ZNF442Q9H7R0 627 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 GLS2Q9UI32 602 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 RPH3ALQ9UNE2 315 aa7.13□□□□□ -1.27
HPS4-205ENST00000429411 PTRH2Q9Y3E5 179 aaKnown RBP7.13□□□□□ -1.27
HPS4-205ENST00000429411 MGAQ8IWI9 3026 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 SULT1C2O00338 296 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 LRP3O75074 770 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 AQP8O94778 261 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 TIAF1O95411 115 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 RRADP55042 308 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 PPIAP62937 165 aaKnown RBP7.12□□□□□ -1.27
HPS4-205ENST00000429411 HTD2P86397 168 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.12□□□□□ -1.27
HPS4-205ENST00000429411 TSPO2Q5TGU0 170 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 FNDC7Q5VTL7 733 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 CPEB2Q7Z5Q1 589 aaKnown RBP7.12□□□□□ -1.27
HPS4-205ENST00000429411 ZBTB34Q8NCN2 500 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 OR56B1Q8NGI3 324 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 FNDC9Q8TBE3 224 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 RNF141Q8WVD5 230 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 DYRK2Q92630 601 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 RNF166Q96A37 237 aaPredicted RBP7.12□□□□□ -1.27
HPS4-205ENST00000429411 ZNF2Q9BSG1 426 aaPredicted RBP7.12□□□□□ -1.27
HPS4-205ENST00000429411 G6PC2Q9NQR9 355 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 ZNF629Q9UEG4 869 aaPredicted RBP7.12□□□□□ -1.27
HPS4-205ENST00000429411 RBM7Q9Y580 266 aaKnown RBP7.12□□□□□ -1.27
HPS4-205ENST00000429411 A0A1W2PRV1 198 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 LNP1A1A4G5 178 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 NME2P1O60361 137 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 CLPSP04118 112 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 RCC1P18754 421 aaPredicted RBP7.12□□□□□ -1.27
HPS4-205ENST00000429411 MPGP29372 298 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 CYCSP99999 105 aaKnown RBP7.12□□□□□ -1.27
HPS4-205ENST00000429411 PCK2Q16822 640 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 CDCP2Q5VXM1 449 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 GUSBP11Q6P575 273 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 OGFOD3Q6PK18 319 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 SGPP2Q8IWX5 399 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 SLC38A9Q8NBW4 561 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 OR5L1Q8NGL2 311 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 SLC39A7Q92504 469 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 SCGB3A2Q96PL1 93 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 UCK1Q9HA47 277 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.12□□□□□ -1.27
HPS4-205ENST00000429411 RASL12Q9NYN1 266 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 TNFSF18Q9UNG2 199 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 PRELID3BQ9Y3B1 194 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 FAM208BQ5VWN6 2430 aa7.12□□□□□ -1.27
HPS4-205ENST00000429411 BTBD17A6NE02 478 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 K7EPK0 472 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 KLK3P07288 261 aaPredicted RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 NR2C1P13056 603 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 NFYBP25208 207 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 CAV2P51636 162 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 EFNA3P52797 238 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 TAS2R31P59538 309 aa7.11□□□□□ -1.27
HPS4-205ENST00000429411 DCDP81605 110 aaKnown RBP7.11□□□□□ -1.27
HPS4-205ENST00000429411 IKZF1Q13422 519 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms