RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 MMP24Q9Y5R2 645 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 DNAJC13O75165 2243 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 MUC22E2RYF6 1773 aaPredicted RBP10.98□□□□□ -0.65
CDH3-202ENST00000429102 IFNA21P01568 189 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 FSTP19883 344 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 NHLH2Q02577 135 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 MST1LQ2TV78 715 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 PRSS54Q6PEW0 395 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 OR56B1Q8NGI3 324 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 MRPL38Q96DV4 380 aaKnown RBP10.98□□□□□ -0.65
CDH3-202ENST00000429102 C2orf50Q96LR7 162 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 FBRSQ9HAH7 460 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 MMP26Q9NRE1 261 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 MMACHCQ9Y4U1 282 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 LTBP2Q14767 1821 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 A0A1B0GX78 115 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 LIPT2A6NK58 231 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 SNAPC5O75971 98 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 FAM157CP0CG43 387 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 PIGPP57054 158 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 UBE2V2Q15819 145 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 EIF2S3LQ2VIR3 472 aaKnown RBP10.97□□□□□ -0.65
CDH3-202ENST00000429102 TMEM182Q6ZP80 229 aaPredicted RBP10.97□□□□□ -0.65
CDH3-202ENST00000429102 SGPP2Q8IWX5 399 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 CEP250Q9BV73 2442 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 IGHV1OR21-1A0A087WYE8 117 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 TMEM14DPA8MWL7 114 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 SRSF10O75494 262 aaKnown RBP10.97□□□□□ -0.65
CDH3-202ENST00000429102 ONECUT2O95948 504 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 IL2RAP01589 272 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 FASLGP48023 281 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 FAM209BQ5JX69 171 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.97□□□□□ -0.65
CDH3-202ENST00000429102 GGNBP1Q5YKI7 109 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 MYPOPQ86VE0 399 aaPredicted RBP10.97□□□□□ -0.65
CDH3-202ENST00000429102 AKR7LQ8NHP1 331 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 PHYHIPLQ96FC7 376 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 ZNF385AQ96PM9 386 aaKnown RBP10.97□□□□□ -0.65
CDH3-202ENST00000429102 CDRT15L2A8MXV6 281 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 FABP1P07148 127 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 DUSP1P28562 367 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 TAS2R31P59538 309 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 SMAD4Q13485 552 aaKnown RBP10.97□□□□□ -0.65
CDH3-202ENST00000429102 TCEAL3Q969E4 200 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 CCNL2Q96S94 520 aaPredicted RBP10.97□□□□□ -0.65
CDH3-202ENST00000429102 SLC26A1Q9H2B4 701 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 OR51B6Q9H340 312 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 PLA2G2EQ9NZK7 142 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 RCC2Q9P258 522 aaKnown RBP10.97□□□□□ -0.65
CDH3-202ENST00000429102 CACNA1GO43497 2377 aa10.97□□□□□ -0.65
CDH3-202ENST00000429102 NDUFA2O43678 99 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 DUX1O43812 170 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 LCATP04180 440 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 DCAF7P61962 342 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 HNRNPKP61978 463 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDH3-202ENST00000429102 AWAT1Q58HT5 328 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 AADACL3Q5VUY0 350 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 SLC25A24Q6NUK1 477 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 Q7L0L9 218 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 LILRB1Q8NHL6 650 aaPredicted RBP10.96□□□□□ -0.65
CDH3-202ENST00000429102 FAM131CQ96AQ9 280 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 DEFB126Q9BYW3 111 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 IGKV3D-11A0A0A0MRZ8 115 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 IFNA2P01563 188 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 CHRM2P08172 466 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 FBP1P09467 338 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 OR5AC1P0C628 307 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 OR5H8P0DN80 308 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 QRFPP83859 136 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 RSU1Q15404 277 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 ZNF528Q3MIS6 628 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 PHF19Q5T6S3 580 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 PLXDC1Q8IUK5 500 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 SLC30A7Q8NEW0 376 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 UBALD1Q8TB05 177 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 NEK7Q8TDX7 302 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 S100PBPQ96BU1 408 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 B3GAT1Q9P2W7 334 aa10.96□□□□□ -0.65
CDH3-202ENST00000429102 IGHV1OR15-9A0A0B4J2B8 117 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 ZNF727A8MUV8 499 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 ISG15P05161 165 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 HKR1P10072 659 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 ZNF708P17019 499 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 ZNF17P17021 662 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 NKAIN1Q4KMZ8 207 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 C4orf17Q53FE4 359 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 DTWD2Q8NBA8 298 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 ABHD14AQ9BUJ0 271 aa10.96□□□□□ -0.66
CDH3-202ENST00000429102 H3BP45 60 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 ACAA1P09110 424 aaPredicted RBP10.95□□□□□ -0.66
CDH3-202ENST00000429102 HAGHQ16775 308 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 PIGYQ3MUY2 71 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 KIAA2026Q5HYC2 2103 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 ZNF529Q6P280 563 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 ZNF565Q8N9K5 539 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 ZFP62Q8NB50 900 aaPredicted RBP10.95□□□□□ -0.66
CDH3-202ENST00000429102 OR9K2Q8NGE7 335 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 PECRQ9BY49 303 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 NMES1Q9C002 83 aa10.95□□□□□ -0.66
CDH3-202ENST00000429102 PADI1Q9ULC6 663 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms