RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 HSD17B1P14061 328 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 AMY2BP19961 511 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ELF3P78545 371 aaPredicted RBP9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 RIPPLY1Q0D2K3 151 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DBPQ10586 325 aaPredicted RBP9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 LYPD4Q6UWN0 246 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 C16orf89Q6UX73 402 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 MOB3CQ70IA8 216 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CENPVQ7Z7K6 275 aaPredicted RBP9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZNF573Q86YE8 665 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 AQP11Q8NBQ7 271 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 SDSLQ96GA7 329 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OR51V1Q9H2C8 321 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 REEP1Q9H902 201 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CMC2Q9NRP2 79 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 VWFP04275 2813 aa9.96□□□□□ -0.81
HLA-DQB3-203ENST00000425319 MEGF11A6BM72 1044 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 RFPL4AA6NLU0 287 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 E9PQ18 207 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 RFPL4AL1F8VTS6 287 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ARG1P05089 322 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 HMGN1P05114 100 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 SELLP14151 372 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 COX7A1P24310 79 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PRDX2P32119 198 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 OPRL1P41146 370 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 VDAC2P45880 294 aaPredicted RBP9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 BMXP51813 675 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 DLX1P56177 255 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 RPS7P62081 194 aaKnown RBP9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 SLC35A2P78381 396 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 DYNC1I2Q13409 638 aaKnown RBP9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 GK3PQ14409 553 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ZNF684Q5T5D7 378 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CGB2Q6NT52 195 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ZBTB49Q6ZSB9 765 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 LYG1Q8N1E2 194 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ZNRF4Q8WWF5 429 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 STMN2Q93045 179 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CDRT15Q96T59 188 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 MROQ9BYG7 248 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 NMNAT2Q9BZQ4 307 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 MMP28Q9H239 520 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CCDC134Q9H6E4 229 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ZNF556Q9HAH1 456 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 AURKAIP1Q9NWT8 199 aaPredicted RBP9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ENPP5Q9UJA9 477 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 LAMP5Q9UJQ1 280 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 TCF19Q9Y242 345 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 LYVE1Q9Y5Y7 322 aa9.96□□□□□ -0.82
HLA-DQB3-203ENST00000425319 TET2Q6N021 2002 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 VGLL3A8MV65 326 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 RHBDL1O75783 438 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 NXPH2O95156 264 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 MPIG6BO95866 241 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 SEMG1P04279 462 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CD28P10747 220 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 AZGP1P25311 298 aaKnown RBP9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 IL18R1Q13478 541 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 MICAQ29983 383 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 FAM98BQ52LJ0 330 aaKnown RBP9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 KLHL12Q53G59 568 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ZBTB37Q5TC79 503 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 FOXB2Q5VYV0 432 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PLCXD3Q63HM9 321 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 TMEM200BQ69YZ2 307 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 HAGHLQ6PII5 290 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 DEGS2Q6QHC5 323 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 GDPD3Q7L5L3 318 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PRSS45Q7RTY3 260 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PGAM4Q8N0Y7 254 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 OR9Q2Q8NGE9 314 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 OTOSQ8NHW6 89 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PHF21AQ96BD5 680 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CITED2Q99967 270 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ELAC2Q9BQ52 826 aaKnown RBP9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 OR51I2Q9H344 312 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 GLS2Q9UI32 602 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 TMEM14AQ9Y6G1 99 aa9.95□□□□□ -0.82
HLA-DQB3-203ENST00000425319 IGKV1D-17A0A075B6S4 117 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 A0A0U1RQV5 110 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 TMEM269A0A1B0GVZ9 245 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 GNGT2O14610 69 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ARPC2O15144 300 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ZNF254O75437 659 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 NRASP01111 189 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CHRM2P08172 466 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CLUP10909 449 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 BRS3P32247 399 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 SSX2Q16385 188 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CEP78Q5JTW2 689 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ACP7Q6ZNF0 438 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 Q8N2B8 174 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 OR5AU1Q8NGC0 362 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 OR4M1Q8NGD0 313 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 AQP3Q92482 292 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 RCC1LQ96I51 464 aaKnown RBP9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 OR5M11Q96RB7 305 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 DGCR6LQ9BY27 220 aa9.94□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ELL3Q9HB65 397 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms