RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 VGLL3A8MV65 326 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 ZNF732B4DXR9 585 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 H0YAE9 185 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 ANGPTL7O43827 346 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 SLC2A5P22732 501 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 POU1F1P28069 291 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 HCCSP53701 268 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 DLX6P56179 175 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 PSMA6P60900 246 aaKnown RBP12.12□□□□□ -0.47
ATG4B-209ENST00000425239 GNG3P63215 75 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 BLMHQ13867 455 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 FAM189A2Q15884 450 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 CEP78Q5JTW2 689 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 ACP7Q6ZNF0 438 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 KCTD8Q6ZWB6 473 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 TMEM179BQ7Z7N9 219 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 OR5A2Q8NGI9 324 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 OR4C13Q8NGP0 309 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 THEM6Q8WUY1 208 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 PPP1R14AQ96A00 147 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 OR51V1Q9H2C8 321 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 MED4Q9NPJ6 270 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 FAM206AQ9NX38 181 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 SAMHD1Q9Y3Z3 626 aaKnown RBP12.12□□□□□ -0.47
ATG4B-209ENST00000425239 LRP12Q9Y561 859 aa12.12□□□□□ -0.47
ATG4B-209ENST00000425239 PRR32B1ATL7 298 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 HABP2Q14520 560 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-209ENST00000425239 LCN8Q6JVE9 175 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 PLBD1Q6P4A8 553 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 REC114Q7Z4M0 266 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 THAP5Q7Z6K1 395 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 PIGWQ7Z7B1 504 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 LHFPL4Q7Z7J7 247 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-209ENST00000425239 LYG1Q8N1E2 194 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 TMEM185AQ8NFB2 350 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 OR10G2Q8NGC3 310 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 OR2T6Q8NHC8 308 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 ZNF488Q96MN9 340 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 WNT10AQ9GZT5 417 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 REEP1Q9H902 201 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 RASL12Q9NYN1 266 aa12.11□□□□□ -0.47
ATG4B-209ENST00000425239 ACOD1A6NK06 481 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 RFPL4AA6NLU0 287 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 RFPL4AL1F8VTS6 287 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 PRODHO43272 600 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 NOS1APO75052 506 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-209ENST00000425239 CD28P10747 220 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 CCL3L1P16619 93 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 MAP2K3P46734 347 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 RAB13P51153 203 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 BMXP51813 675 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 CDK5Q00535 292 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 C16orf89Q6UX73 402 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 LIAT1Q6ZQX7 453 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 Q6ZS46 218 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 FAM185AQ8N0U4 392 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 POC1AQ8NBT0 407 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 BBS1Q8NFJ9 593 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 ZNF671Q8TAW3 534 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 ITFG2Q969R8 447 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 MMP28Q9H239 520 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 NIPAL2Q9H841 368 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 HEXA-AS1Q9H8Q6 139 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 RAB18Q9NP72 206 aa12.1□□□□□ -0.47
ATG4B-209ENST00000425239 DSCAML1Q8TD84 2053 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 ARRDC5A6NEK1 342 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 C17orf98A8MV24 154 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 SYNGR1O43759 233 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 SRSF10O75494 262 aaKnown RBP12.09□□□□□ -0.47
ATG4B-209ENST00000425239 PGA5P0DJD9 388 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 VSIG10L2P0DP72 767 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 PRDX2P32119 198 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 RPL31P62899 125 aaKnown RBP12.09□□□□□ -0.47
ATG4B-209ENST00000425239 TRIM25Q14258 630 aaKnown RBP12.09□□□□□ -0.47
ATG4B-209ENST00000425239 ZNF273Q14593 569 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 GINS1Q14691 196 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 HSP90B2PQ58FF3 399 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 TMEM42Q69YG0 159 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 HAGHLQ6PII5 290 aaPredicted RBP12.09□□□□□ -0.47
ATG4B-209ENST00000425239 CPOQ8IVL8 374 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 ZNF561Q8N587 486 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 PAPD5Q8NDF8 572 aaKnown RBP12.09□□□□□ -0.47
ATG4B-209ENST00000425239 TEX47Q8TBZ9 253 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 OTULINQ96BN8 352 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 CLPTM1LQ96KA5 538 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 HIST1H2AAQ96QV6 131 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 CDCA4Q9BXL8 241 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 NPFFR1Q9GZQ6 430 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 HES4Q9HCC6 221 aa12.09□□□□□ -0.47
ATG4B-209ENST00000425239 A6NDX4 124 aa12.08□□□□□ -0.48
ATG4B-209ENST00000425239 OR5B21A6NL26 309 aa12.08□□□□□ -0.48
ATG4B-209ENST00000425239 ODF3BA8MYP8 253 aa12.08□□□□□ -0.48
ATG4B-209ENST00000425239 PRR23D1E9PI22 279 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-209ENST00000425239 H3BN98 237 aa12.08□□□□□ -0.48
ATG4B-209ENST00000425239 PIN1P1O15428 100 aa12.08□□□□□ -0.48
ATG4B-209ENST00000425239 PRR23D2P0DMB1 279 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-209ENST00000425239 CEBPDP49716 269 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-209ENST00000425239 ERVK11-1P61568 191 aa12.08□□□□□ -0.48
ATG4B-209ENST00000425239 ROM1Q03395 351 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms