RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ANGPTL7O43827 346 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 ACAA1P09110 424 aaPredicted RBP13.21□□□□□ -0.29
COL18A1-205ENST00000423214 CSF1P09603 554 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 ANXA8P13928 327 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 HOXB6P17509 224 aaKnown RBP13.21□□□□□ -0.29
COL18A1-205ENST00000423214 GABRA5P31644 462 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 MAP2K3P46734 347 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 CAPZA1P52907 286 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 GNG3P63215 75 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 CDK5Q00535 292 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 C1orf122Q6ZSJ8 110 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 Q6ZTK2 550 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 FAM185AQ8N0U4 392 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 OR51G2Q8NGK0 314 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 OR5D13Q8NGL4 314 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 TNFRSF14Q92956 283 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 DUS3LQ96G46 650 aaKnown RBP13.21□□□□□ -0.29
COL18A1-205ENST00000423214 LAMP5Q9UJQ1 280 aa13.21□□□□□ -0.29
COL18A1-205ENST00000423214 TRBV23-1A0A0A0MS06 115 aa13.2□□□□□ -0.3
COL18A1-205ENST00000423214 ZNF732B4DXR9 585 aa13.2□□□□□ -0.3
COL18A1-205ENST00000423214 DCTDP32321 178 aa13.2□□□□□ -0.3
COL18A1-205ENST00000423214 CEP78Q5JTW2 689 aa13.2□□□□□ -0.3
COL18A1-205ENST00000423214 CPOQ8IVL8 374 aa13.2□□□□□ -0.3
COL18A1-205ENST00000423214 BEND2Q8NDZ0 799 aa13.2□□□□□ -0.3
COL18A1-205ENST00000423214 OR4C13Q8NGP0 309 aa13.2□□□□□ -0.3
COL18A1-205ENST00000423214 FGF23Q9GZV9 251 aaPredicted RBP13.2□□□□□ -0.3
COL18A1-205ENST00000423214 KLHDC2Q9Y2U9 406 aa13.2□□□□□ -0.3
COL18A1-205ENST00000423214 SF3B6Q9Y3B4 125 aaKnown RBP13.2□□□□□ -0.3
COL18A1-205ENST00000423214 IGKV1D-17A0A075B6S4 117 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 RHBDL1O75783 438 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 HMGN1P05114 100 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 RASSF2P50749 326 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 DAPP51397 102 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 LY6EQ16553 131 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 FAM76BQ5HYJ3 339 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 SLC35D3Q5M8T2 416 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 PLCXD3Q63HM9 321 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 KCTD18Q6PI47 426 aaPredicted RBP13.19□□□□□ -0.3
COL18A1-205ENST00000423214 THAP5Q7Z6K1 395 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 ZNRF1Q8ND25 227 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 BBS1Q8NFJ9 593 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 UTP4Q969X6 686 aaKnown RBP13.19□□□□□ -0.3
COL18A1-205ENST00000423214 SSX3Q99909 188 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 TEX12Q9BXU0 123 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 FAM234AQ9H0X4 552 aa13.19□□□□□ -0.3
COL18A1-205ENST00000423214 A0A0U1RQV5 110 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 A0A1W2PPH5 198 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 OR5B21A6NL26 309 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 ATP5HO75947 161 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 PSG2P11465 335 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 HERPUD1Q15011 391 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 LRRC75BQ2VPJ9 315 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 SMIM21Q3B7S5 101 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 CEACAM21Q3KPI0 293 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 SLC35E4Q6ICL7 350 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 ZNF671Q8TAW3 534 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 RAB18Q9NP72 206 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 PAPOLBQ9NRJ5 636 aaKnown RBP13.18□□□□□ -0.3
COL18A1-205ENST00000423214 TVP23BQ9NYZ1 205 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 FBLN5Q9UBX5 448 aa13.18□□□□□ -0.3
COL18A1-205ENST00000423214 TMEM269A0A1B0GVZ9 245 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 PSMD9O00233 223 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 HCCSP53701 268 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 CRISP1P54107 249 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 APOFQ13790 326 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 SNAPC1Q16533 368 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 ZNF829Q3KNS6 432 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-205ENST00000423214 LCN1P1Q5VSP4 162 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 C1orf146Q5VVC0 180 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 C11orf88Q6PI97 169 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 HAGHLQ6PII5 290 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-205ENST00000423214 MOB3CQ70IA8 216 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 AMIGO2Q86SJ2 522 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 OR5A2Q8NGI9 324 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 OR5K1Q8NHB7 308 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 OR2T6Q8NHC8 308 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 NRBF2Q96F24 287 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 MROQ9BYG7 248 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 OR51I2Q9H344 312 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 RANBP3Q9H6Z4 567 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-205ENST00000423214 FAM206AQ9NX38 181 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 ZNF222Q9UK12 451 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 MAB21L2Q9Y586 359 aa13.17□□□□□ -0.3
COL18A1-205ENST00000423214 hCG_1809904A0A1W2PP81 198 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 A0A1W2PPE2 198 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 A0A1W2PR64 198 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 A0A1W2PRV1 198 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 ACOD1A6NK06 481 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 SLC1A7O00341 560 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 MITFO75030 526 aaPredicted RBP13.16□□□□□ -0.3
COL18A1-205ENST00000423214 MRPL3P09001 348 aaKnown RBP13.16□□□□□ -0.3
COL18A1-205ENST00000423214 ATP6V1B1P15313 513 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 FAHP16930 419 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 ALOX5APP20292 161 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 RPL31P62899 125 aaKnown RBP13.16□□□□□ -0.3
COL18A1-205ENST00000423214 RIPPLY1Q0D2K3 151 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 DMRTC1Q5HYR2 192 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 ZNF684Q5T5D7 378 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 FAHD1Q6P587 224 aa13.16□□□□□ -0.3
COL18A1-205ENST00000423214 DEGS2Q6QHC5 323 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms