RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 ASB10Q8WXI3 467 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 DAZLQ92904 295 aaKnown RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 WDR92Q96MX6 357 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 URM1Q9BTM9 101 aaKnown RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 OR10A2Q9H208 303 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 UNKLQ9H9P5 680 aaKnown RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 CA14Q9ULX7 337 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 CHD7Q9P2D1 2997 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 IGKV1D-8A0A087WSZ0 117 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 METTL12A8MUP2 240 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 C17orf105B2RV13 164 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 XRCC2O43543 280 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 NUDT14O95848 222 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 SRP19P09132 144 aaKnown RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 FABP4P15090 132 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 UBE2KP61086 200 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 DLK1P80370 383 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 FAM189A2Q15884 450 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 CHRFAM7AQ494W8 412 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 SPSB3Q6PJ21 355 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 KLHL24Q6TFL4 600 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 OR5R1Q8NH85 324 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 SNIP1Q8TAD8 396 aaKnown RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 ABHD5Q8WTS1 349 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 SSC4DQ8WTU2 575 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 KCNK17Q96T54 332 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 SIRT7Q9NRC8 400 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 DCAF16Q9NXF7 216 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 TP53TG5Q9Y2B4 290 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 KCNIP3Q9Y2W7 256 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 FAM221BA6H8Z2 402 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 CYB5BO43169 146 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 GP1BBP13224 206 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 ZNF17P17021 662 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 ECI1P42126 302 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 POLR2HP52434 150 aaKnown RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 NHLH2Q02577 135 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 OR2T2Q6IF00 324 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 PTPMT1Q8WUK0 201 aaPredicted RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 MVB12AQ96EY5 273 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 LURAP1Q96LR2 239 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 PISDQ9UG56 409 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 RCL1Q9Y2P8 373 aaKnown RBP9.41□□□□□ -0.9
USP54-204ENST00000422491 SLCO1B1Q9Y6L6 691 aa9.41□□□□□ -0.9
USP54-204ENST00000422491 FRG2CA6NGY1 282 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 A6NIZ1 184 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 FTCDNL1E5RQL4 147 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 MS4A18H0YCH9 400 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 DIRAS3O95661 229 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 TRGC1P0CF51 173 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 PGCP20142 388 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 GALNSP34059 522 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 HSD17B7P56937 341 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 RAP1BP61224 184 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 RND3P61587 244 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 MS4A18Q3C1V0 323 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 SP5Q6BEB4 398 aaPredicted RBP9.4□□□□□ -0.9
USP54-204ENST00000422491 AVL9Q8NBF6 648 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 C11orf40Q8WZ69 217 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 FRZBQ92765 325 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 ZNF2Q9BSG1 426 aaPredicted RBP9.4□□□□□ -0.9
USP54-204ENST00000422491 PECRQ9BY49 303 aa9.4□□□□□ -0.9
USP54-204ENST00000422491 RRP8O43159 456 aaKnown RBP9.4□□□□□ -0.91
USP54-204ENST00000422491 ANOS1P23352 680 aa9.4□□□□□ -0.91
USP54-204ENST00000422491 IL2RGP31785 369 aa9.4□□□□□ -0.91
USP54-204ENST00000422491 GLIPR1P48060 266 aa9.4□□□□□ -0.91
USP54-204ENST00000422491 OR8G5Q8NG78 346 aa9.4□□□□□ -0.91
USP54-204ENST00000422491 OR51T1Q8NGJ9 327 aa9.4□□□□□ -0.91
USP54-204ENST00000422491 BMFQ96LC9 184 aa9.4□□□□□ -0.91
USP54-204ENST00000422491 PACRGQ96M98 296 aaPredicted RBP9.4□□□□□ -0.91
USP54-204ENST00000422491 HIST1H2BLQ99880 126 aa9.4□□□□□ -0.91
USP54-204ENST00000422491 TCEAL2Q9H3H9 227 aaPredicted RBP9.4□□□□□ -0.91
USP54-204ENST00000422491 ATG2BQ96BY7 2078 aa9.4□□□□□ -0.91
USP54-204ENST00000422491 NSG1A0A0A6YYJ2 146 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 DHRS7CA6NNS2 312 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 PHOX2AO14813 284 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 AHSA1O95433 338 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 HCKP08631 526 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 TMEM176BQ3YBM2 270 aaPredicted RBP9.39□□□□□ -0.91
USP54-204ENST00000422491 CRIP3Q6Q6R5 217 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 ZNF429Q86V71 674 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 STT3BQ8TCJ2 826 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 ADAMTS18Q8TE60 1221 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 ADIPOR1Q96A54 375 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 SLC46A1Q96NT5 459 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 ABHD14AQ9BUJ0 271 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 KIAA1456Q9P272 454 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 FOXD3Q9UJU5 478 aaPredicted RBP9.39□□□□□ -0.91
USP54-204ENST00000422491 RFNGQ9Y644 331 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 IGKV1-9A0A0C4DH69 117 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 SERPINE3A8MV23 424 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 A8MWP6 167 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 ALG1L2C9J202 215 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 ZNF878C9JN71 531 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 ADAM10O14672 748 aa9.39□□□□□ -0.91
USP54-204ENST00000422491 BLVRBP30043 206 aaPredicted RBP9.39□□□□□ -0.91
USP54-204ENST00000422491 RAB4BP61018 213 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms