RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CDK5Q00535 292 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 OR13D1Q8NGV5 346 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF416Q9BWM5 594 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 GPR87Q9BY21 358 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 ASB1Q9Y576 335 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF320A2RRD8 509 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 ATP6V1G2-DDX39BF2Z307 99 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 ATXN7O15265 892 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-205ENST00000418258 FCGR3BO75015 233 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 IGLV3-25P01717 112 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 TP53I13Q8NBR0 393 aaPredicted RBP10.05□□□□□ -0.8
PTCH1-205ENST00000418258 HSD17B10Q99714 261 aaKnown RBP10.05□□□□□ -0.8
PTCH1-205ENST00000418258 ARHGDIGQ99819 225 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 PIGMQ9H3S5 423 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 SERGEFQ9UGK8 458 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 PTBP1P26599 531 aaKnown RBP eCLIP10.05□□□□□ -0.83e-8■■■■□ 20.8
PTCH1-205ENST00000418258 FUT7Q11130 342 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 EXTL1Q92935 676 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 SLC25A32Q9H2D1 315 aa10.05□□□□□ -0.8
PTCH1-205ENST00000418258 AHCTF1Q8WYP5 2266 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 A0A0A6YYJ9 748 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 LOC102723971A0A1B0GUV8 181 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 F2RL2O00254 374 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 ZDHHC11BP0C7U3 371 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 OR8B3Q8NGG8 313 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 SCARB1Q8WTV0 552 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 OR8B2Q96RD0 313 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 SLC25A37Q9NYZ2 338 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF716A6NP11 495 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 SOX15O60248 233 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 GABRA1P14867 456 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 UBE2MP61081 183 aaKnown RBP10.04□□□□□ -0.8
PTCH1-205ENST00000418258 HOXA4Q00056 320 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-205ENST00000418258 ACVR1Q04771 509 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 TMEM267Q0VDI3 215 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-205ENST00000418258 OR2F1Q13607 317 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 TUSC1Q2TAM9 212 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 OR5R1Q8NH85 324 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 SMIM7Q9BQ49 75 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 RAB18Q9NP72 206 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 COA4Q9NYJ1 87 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 OR5AP2Q8NGF4 316 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 MCHR2Q969V1 340 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 CNRIP1Q96F85 164 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-205ENST00000418258 GPANK1O95872 356 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 SFTPCP11686 197 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 ZXDAP98168 799 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 GLCCI1Q86VQ1 547 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 C4orf45Q96LM5 186 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 WDR61Q9GZS3 305 aaKnown RBP10.04□□□□□ -0.8
PTCH1-205ENST00000418258 OR5V1Q9UGF6 321 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 hADV38S2A0JD32 116 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 H3BMH7 237 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 AQP8O94778 261 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 OR4E1P0C645 316 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 RAB7AP51149 207 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 FABP5Q01469 135 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF774Q6NX45 483 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 CALHM3Q86XJ0 350 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 IGHV1OR21-1A0A087WYE8 117 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 SERPINE3A8MV23 424 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 CD3DP04234 171 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 GIPP09681 153 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-205ENST00000418258 CDK5R1Q15078 307 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 PWWP2BQ6NUJ5 590 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 DYNLRB2Q8TF09 96 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 ZFP64Q9NPA5 681 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 PSG11Q9UQ72 335 aa10.04□□□□□ -0.8
PTCH1-205ENST00000418258 CEP290O15078 2479 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 A0A1W2PN81 502 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 TCRBV5S1A1TA0A578 114 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 FUT3P21217 361 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 BRS3P32247 399 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 CHRNA7P36544 502 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 CLEC12BQ2HXU8 276 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 ADAM5Q6NVV9 412 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 LYSMD2Q8IV50 215 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 RTN4IP1Q8WWV3 396 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-205ENST00000418258 SRRQ9GZT4 340 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 LHX9Q9NQ69 397 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 DCAF16Q9NXF7 216 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 RCL1Q9Y2P8 373 aaKnown RBP10.03□□□□□ -0.8
PTCH1-205ENST00000418258 ANKRD36A6QL64 1941 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 FGF2P09038 288 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 SCGB1C2P0DMR2 95 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 OR52L2PQ8NGH6 319 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 RBPMSQ93062 196 aaKnown RBP10.03□□□□□ -0.8
PTCH1-205ENST00000418258 TMPRSS13Q9BYE2 586 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 BCL2L10Q9HD36 194 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 K7ESF4 209 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 ADAM20O43506 726 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 ID4P47928 161 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 FABP9Q0Z7S8 132 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 RFESDQ8TAC1 157 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 GPBAR1Q8TDU6 330 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 RASL11BQ9BPW5 248 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 GABARAPL3Q9BY60 117 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 TMEM30AQ9NV96 361 aa10.03□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF230Q9UIE0 474 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms