RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 MRPL15Q9P015 296 aaKnown RBP17.81■□□□□ 0.44
CASC3-203ENST00000418132 NLKQ9UBE8 527 aa17.81■□□□□ 0.44
CASC3-203ENST00000418132 FAM240BA0A1B0GVZ2 78 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 IQCF6A8MYZ5 107 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 ATXN7O15265 892 aaPredicted RBP17.8■□□□□ 0.44
CASC3-203ENST00000418132 KDM4BO94953 1096 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 PPP3CBP16298 524 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 TAS2R20P59543 309 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 LILRB4Q8NHJ6 448 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 FGF23Q9GZV9 251 aaPredicted RBP17.8■□□□□ 0.44
CASC3-203ENST00000418132 A0A0A6YYH2 397 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 PQLC2LA1A4F0 135 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 A6NJ64 397 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 THBDP07204 575 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 MPV17P39210 176 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 ASCL4Q6XD76 172 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 TMEM104Q8NE00 496 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 OR5A2Q8NGI9 324 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 C15orf40Q8WUR7 153 aa17.8■□□□□ 0.44
CASC3-203ENST00000418132 CACNA1BQ00975 2339 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 A0A0B4J293 547 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 A0A1B0GUH1 482 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 GPR176Q14439 515 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 ZNF718Q3SXZ3 478 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 TMEM255AQ5JRV8 349 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 MBNL2Q5VZF2 373 aaKnown RBP17.79■□□□□ 0.44
CASC3-203ENST00000418132 ZBTB8BQ8NAP8 495 aaPredicted RBP17.79■□□□□ 0.44
CASC3-203ENST00000418132 OR5P3Q8WZ94 311 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 FAM46BQ96A09 425 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 PHF21AQ96BD5 680 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 ING4Q9UNL4 249 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 SPEF1Q9Y4P9 236 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 METTL21EPA6NDL7 271 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 GSTZ1O43708 216 aaPredicted RBP17.79■□□□□ 0.44
CASC3-203ENST00000418132 TMEM225BP0DP42 221 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 KITLGP21583 273 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 CD40P25942 277 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 ALKBH6Q3KRA9 238 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 RSBN1Q5VWQ0 802 aaPredicted RBP17.79■□□□□ 0.44
CASC3-203ENST00000418132 CDH24Q86UP0 819 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 GALNT11Q8NCW6 608 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 HIST1H2AAQ96QV6 131 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 S100A13Q99584 98 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 CST11Q9H112 138 aa17.79■□□□□ 0.44
CASC3-203ENST00000418132 CDC14BO60729 498 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 CA6P23280 308 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 SRP9P49458 86 aaKnown RBP17.78■□□□□ 0.44
CASC3-203ENST00000418132 NKX6-1P78426 367 aaPredicted RBP17.78■□□□□ 0.44
CASC3-203ENST00000418132 DGCR2P98153 550 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 PDZK1IP1Q13113 114 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 SNTB2Q13425 540 aaKnown RBP17.78■□□□□ 0.44
CASC3-203ENST00000418132 ESPL1Q14674 2120 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 SLC22A6Q4U2R8 563 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 RAB12Q6IQ22 244 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 TMEM108Q6UXF1 575 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 OR6F1Q8NGZ6 308 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 SMIM4Q8WVI0 70 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 YIPF5Q969M3 257 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 LPAR5Q9H1C0 372 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 ERRFI1Q9UJM3 462 aaPredicted RBP17.78■□□□□ 0.44
CASC3-203ENST00000418132 PURGQ9UJV8 347 aaKnown RBP17.78■□□□□ 0.44
CASC3-203ENST00000418132 CFAP46Q8IYW2 2715 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 CADP27708 2225 aa17.78■□□□□ 0.44
CASC3-203ENST00000418132 A0A1W2PP11 408 aa17.77■□□□□ 0.44
CASC3-203ENST00000418132 FAM90A27PA6NNH2 459 aa17.77■□□□□ 0.44
CASC3-203ENST00000418132 CD3GP09693 182 aa17.77■□□□□ 0.44
CASC3-203ENST00000418132 MRPS10P82664 201 aaKnown RBP17.77■□□□□ 0.44
CASC3-203ENST00000418132 RNASE12Q5GAN4 147 aaKnown RBP17.77■□□□□ 0.44
CASC3-203ENST00000418132 WFDC8Q8IUA0 241 aa17.77■□□□□ 0.44
CASC3-203ENST00000418132 PXT1Q8NFP0 134 aa17.77■□□□□ 0.44
CASC3-203ENST00000418132 DVL3Q92997 716 aaPredicted RBP17.77■□□□□ 0.44
CASC3-203ENST00000418132 RNASE6Q93091 150 aaKnown RBP17.77■□□□□ 0.44
CASC3-203ENST00000418132 UPRTQ96BW1 309 aa17.77■□□□□ 0.44
CASC3-203ENST00000418132 GAL3ST1Q99999 423 aa17.77■□□□□ 0.44
CASC3-203ENST00000418132 TMEM59Q9BXS4 323 aa17.77■□□□□ 0.44
CASC3-203ENST00000418132 TRAV18A0A075B6X5 111 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 OR5B21A6NL26 309 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 RAB27BO00194 218 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 SPRY1O43609 319 aaPredicted RBP17.77■□□□□ 0.43
CASC3-203ENST00000418132 SCGNO76038 276 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 MPIG6BO95866 241 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 PTAFRP25105 342 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 GCH1P30793 250 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 GLRXP35754 106 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 GPM6AP51674 278 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 CBX3Q13185 183 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 FAM189A2Q15884 450 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 HACD4Q5VWC8 232 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 RGS7BPQ6MZT1 257 aaPredicted RBP17.77■□□□□ 0.43
CASC3-203ENST00000418132 CALHM1Q8IU99 346 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 RNF170Q96K19 258 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 WFIKKN1Q96NZ8 548 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 METTL9Q9H1A3 318 aa17.77■□□□□ 0.43
CASC3-203ENST00000418132 HMX3A6NHT5 357 aa17.76■□□□□ 0.43
CASC3-203ENST00000418132 ZNF732B4DXR9 585 aa17.76■□□□□ 0.43
CASC3-203ENST00000418132 ATP6V1G2-DDX39BF2Z307 99 aa17.76■□□□□ 0.43
CASC3-203ENST00000418132 ANGPTL7O43827 346 aa17.76■□□□□ 0.43
CASC3-203ENST00000418132 CRTAPO75718 401 aaPredicted RBP17.76■□□□□ 0.43
CASC3-203ENST00000418132 SLC6A1P30531 599 aa17.76■□□□□ 0.43
CASC3-203ENST00000418132 FABP6P51161 128 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms