RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 HAGHLQ6PII5 290 aaPredicted RBP12.92□□□□□ -0.34
ITGB1-204ENST00000417122 CBR4Q8N4T8 237 aa12.92□□□□□ -0.34
ITGB1-204ENST00000417122 ZNF671Q8TAW3 534 aa12.92□□□□□ -0.34
ITGB1-204ENST00000417122 C1orf147Q96MC9 270 aaPredicted RBP12.92□□□□□ -0.34
ITGB1-204ENST00000417122 DUX5Q96PT3 197 aa12.92□□□□□ -0.34
ITGB1-204ENST00000417122 TBX15Q96SF7 602 aa12.92□□□□□ -0.34
ITGB1-204ENST00000417122 SIRPDQ9H106 197 aa12.92□□□□□ -0.34
ITGB1-204ENST00000417122 ZMAT3Q9HA38 289 aaKnown RBP12.92□□□□□ -0.34
ITGB1-204ENST00000417122 GPR173Q9NS66 373 aa12.92□□□□□ -0.34
ITGB1-204ENST00000417122 NLKQ9UBE8 527 aa12.92□□□□□ -0.34
ITGB1-204ENST00000417122 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.92□□□□□ -0.344e-6■■□□□ 13.2
ITGB1-204ENST00000417122 A6NIN4 97 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 E9PQ18 207 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 DLGAP1O14490 977 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 ENTPD6O75354 484 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 SULT1C4O75897 302 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 TFF1P04155 84 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 CCL1P22362 96 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 COMPP49747 757 aaPredicted RBP12.91□□□□□ -0.34
ITGB1-204ENST00000417122 SNRPGP62308 76 aaKnown RBP12.91□□□□□ -0.34
ITGB1-204ENST00000417122 ODF4Q2M2E3 257 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 SLC25A30Q5SVS4 291 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 MEDAGQ5VYS4 303 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 TMEM42Q69YG0 159 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 ZNF788Q6ZQV5 615 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 Q6ZSR3 168 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 CATSPERDQ86XM0 798 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 ANGPTL6Q8NI99 470 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 AQP3Q92482 292 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 RORBQ92753 470 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 TMIGD2Q96BF3 282 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 MED30Q96HR3 178 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 GAFA1Q96PS6 74 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 C9orf16Q9BUW7 83 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 S100A14Q9HCY8 104 aa12.91□□□□□ -0.34
ITGB1-204ENST00000417122 CENPVL3A0A0U1RRI6 287 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 A0A1B0GVI7 797 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 MDFIC2A0A1B0GVS7 189 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 OR2AT4A6NND4 320 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 DHRS7CA6NNS2 312 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 SELLP14151 372 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 HAAOP46952 286 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 IL13RA1P78552 427 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 ZNF85Q03923 595 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 PDCD1Q15116 288 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 CDONQ4KMG0 1287 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 RUSC1-AS1Q66K80 236 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 FAM220AQ7Z4H9 259 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 ZNF573Q86YE8 665 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 LY6G5BQ8NDX9 201 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 DMRTB1Q96MA1 342 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 GNG8Q9UK08 70 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 KPTNQ9Y664 436 aa12.9□□□□□ -0.34
ITGB1-204ENST00000417122 H3BSH0 61 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 CLDN34H7C241 214 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 SIGLEC5O15389 551 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 SYT7O43581 403 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 SYNGR1O43759 233 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
ITGB1-204ENST00000417122 ACAA1P09110 424 aaPredicted RBP12.89□□□□□ -0.35
ITGB1-204ENST00000417122 PSG2P11465 335 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 CFPP27918 469 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 GABRA2P47869 451 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 SLC9A3R2Q15599 337 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 OCLNQ16625 522 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 DGUOKQ16854 277 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 DEFB112Q30KQ8 113 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 TP53I3Q53FA7 332 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 PRSS35Q8N3Z0 413 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 GATAD2BQ8WXI9 593 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 H1FXQ92522 213 aaKnown RBP12.89□□□□□ -0.35
ITGB1-204ENST00000417122 LHX4Q969G2 390 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 ZDHHC16Q969W1 377 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 SLC25A28Q96A46 364 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 RNFT2Q96EX2 444 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 MBOAT4Q96T53 435 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 DCTN5Q9BTE1 182 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 ADI1Q9BV57 179 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 PRDM13Q9H4Q3 707 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 PLEKHA1Q9HB21 404 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 ACOXLQ9NUZ1 547 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 RASL12Q9NYN1 266 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 ONECUT1Q9UBC0 465 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 SLC25A10Q9UBX3 287 aaPredicted RBP12.89□□□□□ -0.35
ITGB1-204ENST00000417122 GMPPBQ9Y5P6 360 aa12.89□□□□□ -0.35
ITGB1-204ENST00000417122 STAB1Q9NY15 2570 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 IGKV1D-17A0A075B6S4 117 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 DAPL1A0PJW8 107 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 ANKRD61A6NGH8 418 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 SNTNA6NMZ2 147 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 J3QT63 122 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 HKR1P10072 659 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 NDUFB7P17568 137 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 ISL1P61371 349 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 ACTC1P68032 377 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 ACTA1P68133 377 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 ACP7Q6ZNF0 438 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 ZBTB49Q6ZSB9 765 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms