RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 VDAC2P45880 294 aaPredicted RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 SERPINB9P50453 376 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 MRPS22P82650 360 aaKnown RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 RAD51Q06609 339 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 BNIP2Q12982 314 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 PMS2P3Q13401 168 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 NAB1Q13506 487 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 SPANXN3Q5MJ09 141 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 HHATQ5VTY9 493 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 C4orf33Q8N1A6 199 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 FTMTQ8N4E7 242 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 OR13C9Q8NGT0 318 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ZPLD1Q8TCW7 415 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 DCAKDQ8WVC6 231 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 NUS1Q96E22 293 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 CHMP6Q96FZ7 201 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 TBL1YQ9BQ87 522 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 APOL2Q9BQE5 337 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 DRC3Q9H069 523 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 HRASLS2Q9NWW9 162 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 KLHL21Q9UJP4 597 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 PEX16Q9Y5Y5 336 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 CDH10Q9Y6N8 788 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ICE1Q9Y2F5 2266 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 IGHV3-20A0A0C4DH32 117 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 A0A0G2JLM5 398 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 FAM159BA6NKW6 160 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 TRIM49D1C9J1S8 452 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 CRLF1O75462 422 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 CLDN11O75508 207 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 EEDO75530 441 aaKnown RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 AHSA1O95433 338 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 SLC2A10O95528 541 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 HLA-DQB2P05538 268 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 RHOCP08134 193 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 HOXC4P09017 264 aaPredicted RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 COX6B1P14854 86 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 RIDAP52758 137 aaKnown RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 APOC4P55056 127 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 PRPS1P60891 318 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 NUTF2P61970 127 aaKnown RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 SLC1A5Q15758 541 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 CYP51A1Q16850 503 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ZNF691Q5VV52 312 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 STEAP4Q687X5 459 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 FRA10AC1Q70Z53 315 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 CEACAM19Q7Z692 300 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 PIANPQ8IYJ0 282 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ARPC1AQ92747 370 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ILKAPQ9H0C8 392 aaPredicted RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 TMEM100Q9NV29 134 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 GMPPBQ9Y5P6 360 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 V9GY05 133 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 TRPM6Q9BX84 2022 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 A0A0A6YYD5 115 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 IGHV2-70DA0A0C4DH43 119 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ISPDA4D126 451 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 PSMB11A5LHX3 300 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 COPEO14579 308 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ACOT8O14734 319 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 AQP8O94778 261 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ZNF432O94892 652 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 TBX6O95947 436 aaPredicted RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 RENP00797 406 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 RPA3P35244 121 aaPredicted RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 MAS1LP35410 378 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ACVRL1P37023 503 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 AQP2P41181 271 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 CBX5P45973 191 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 SLC18A1P54219 525 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 RPS24P62847 133 aaKnown RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 SRPXP78539 464 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 GNA12Q03113 381 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 POU6F1Q14863 301 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 PIGGQ5H8A4 983 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 COQ5Q5HYK3 327 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 FAHD2BQ6P2I3 314 aaPredicted RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 FUNDC1Q8IVP5 155 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 KLHDC8BQ8IXV7 354 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ABHD12Q8N2K0 398 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 Q8NBF4 154 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 MRGPRDQ8TDS7 321 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ZNRF4Q8WWF5 429 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ITLN2Q8WWU7 325 aaPredicted RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 FAHD2AQ96GK7 314 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 MAGEB18Q96M61 343 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 ZNF599Q96NL3 588 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 KLF6Q99612 283 aaPredicted RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 ACTR3CQ9C0K3 210 aaPredicted RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 EDA2RQ9HAV5 297 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 OR2S2Q9NQN1 319 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 FBXO8Q9NRD0 319 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 B3GNT2Q9NY97 397 aa2.03□□□□□ -2.08
MCF2-204ENST00000414978 TBL2Q9Y4P3 447 aaKnown RBP2.03□□□□□ -2.08
MCF2-204ENST00000414978 KALRNO60229 2985 aa2.03□□□□□ -2.09
MCF2-204ENST00000414978 A0A0D9SEW6 157 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 SGCEO43556 437 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 TYROBPO43914 113 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 TBL1XO60907 577 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 NXPH4O95158 308 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms