RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 ABRACLQ9P1F3 81 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 GHRLQ9UBU3 117 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 DAPK2Q9UIK4 370 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 LOC100289279A0A1B0GTE1 492 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 LRP5LA4QPB2 252 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 C17orf100A8MU93 164 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 F5H5P2 479 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 IGHV1-46P01743 117 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 ACAA1P09110 424 aaPredicted RBP12.1□□□□□ -0.47
SF3B1-204ENST00000414963 CALCBP10092 127 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 SLC2A2P11168 524 aaPredicted RBP12.1□□□□□ -0.47
SF3B1-204ENST00000414963 MPZP25189 248 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 PDZK1IP1Q13113 114 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 ZNF404Q494X3 552 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 FAM209AQ5JX71 171 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 WDR86Q86TI4 376 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 TMEM200AQ86VY9 491 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 ANGPTL5Q86XS5 388 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 PNLDC1Q8NA58 520 aaKnown RBP12.1□□□□□ -0.47
SF3B1-204ENST00000414963 PXT1Q8NFP0 134 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 OR2Z1Q8NG97 314 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 OR10AD1Q8NGE0 317 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 TBC1D15Q8TC07 691 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 DVL3Q92997 716 aaPredicted RBP12.1□□□□□ -0.47
SF3B1-204ENST00000414963 ELMOD3Q96FG2 381 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 GPER1Q99527 375 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 PKIBQ9C010 78 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 MMP27Q9H306 513 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 CBLN4Q9NTU7 201 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 FBLN5Q9UBX5 448 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 IL19Q9UHD0 177 aa12.1□□□□□ -0.47
SF3B1-204ENST00000414963 SPRY3O43610 288 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 BPNT1O95861 308 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 CD8AP01732 235 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 UBBP0CG47 229 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 TNFSF4P23510 183 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 GATA4P43694 442 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 OR3A4PP47883 348 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 SRP9P49458 86 aaKnown RBP12.09□□□□□ -0.47
SF3B1-204ENST00000414963 PPOXP50336 477 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 SNRPD2P62316 118 aaKnown RBP12.09□□□□□ -0.47
SF3B1-204ENST00000414963 QRFPP83859 136 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 HES5Q5TA89 166 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 LINC00299Q6ZSB3 139 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 CALHM1Q8IU99 346 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 ZNF295-AS1Q8N0V1 137 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 FAM3DQ96BQ1 224 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 C14orf79Q96F83 325 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 MEGF10Q96KG7 1140 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 C1orf147Q96MC9 270 aaPredicted RBP12.09□□□□□ -0.47
SF3B1-204ENST00000414963 PLEKHF2Q9H8W4 249 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 LIN7BQ9HAP6 207 aa12.09□□□□□ -0.47
SF3B1-204ENST00000414963 MRPS28Q9Y2Q9 187 aaKnown RBP12.09□□□□□ -0.47
SF3B1-204ENST00000414963 UTP20O75691 2785 aaKnown RBP12.08□□□□□ -0.48
SF3B1-204ENST00000414963 J3QT63 122 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 LDLRAD4O15165 306 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 CLPXO76031 633 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 TMEM225BP0DP42 221 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 BMP4P12644 408 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 ARSBP15848 533 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 CFHR2P36980 270 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 HAAOP46952 286 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 TNFAIP6P98066 277 aaPredicted RBP12.08□□□□□ -0.48
SF3B1-204ENST00000414963 IL24Q13007 206 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 ZNF154Q13106 437 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 C2orf76Q3KRA6 126 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 MZT2AQ6P582 158 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 C1QL2Q7Z5L3 287 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 C11orf53Q8IXP5 236 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 MKXQ8IYA7 352 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 SCCPDHQ8NBX0 429 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 Q8NFD4 153 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 OR51D1Q8NGF3 324 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 TNFAIP8L1Q8WVP5 186 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 AQP3Q92482 292 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 ERGIC1Q969X5 290 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 PTX4Q96A99 478 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 RFT1Q96AA3 541 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 CMTM3Q96MX0 182 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 NKX3-1Q99801 234 aaPredicted RBP12.08□□□□□ -0.48
SF3B1-204ENST00000414963 TRAF4Q9BUZ4 470 aaPredicted RBP12.08□□□□□ -0.48
SF3B1-204ENST00000414963 RHOFQ9HBH0 211 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 IL36GQ9NZH8 169 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 OR5V1Q9UGF6 321 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 SPATA2Q9UM82 520 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 ETV7Q9Y603 341 aa12.08□□□□□ -0.48
SF3B1-204ENST00000414963 HRNRQ86YZ3 2850 aaPredicted RBP12.08□□□□□ -0.48
SF3B1-204ENST00000414963 GCN1Q92616 2671 aaKnown RBP12.07□□□□□ -0.48
SF3B1-204ENST00000414963 NOS1APO75052 506 aaPredicted RBP12.07□□□□□ -0.48
SF3B1-204ENST00000414963 PAHP00439 452 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 SOD3P08294 240 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 SNRPBP14678 240 aaKnown RBP12.07□□□□□ -0.48
SF3B1-204ENST00000414963 BMXP51813 675 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 CLDN12P56749 244 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 GPR176Q14439 515 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 P2RY14Q15391 338 aa12.07□□□□□ -0.48
SF3B1-204ENST00000414963 TESK1Q15569 626 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms