RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 DAZAP1Q96EP5 407 aaKnown RBP10.6□□□□□ -0.71
PTPRF-205ENST00000414879 PIGMQ9H3S5 423 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 hADV38S2A0JD32 116 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 K7EQM0 130 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 CNIH1O95406 144 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 PGA3P0DJD8 388 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 BMP5P22003 454 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 CD96P40200 585 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 ZNF83P51522 516 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 HES1Q14469 280 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 GABRA6Q16445 453 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 HYAL4Q2M3T9 481 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 FAM209AQ5JX71 171 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 OR51H1Q8NH63 302 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 VWCEQ96DN2 955 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 RHNO1Q9BSD3 238 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 OR2H1Q9GZK4 316 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 COMMD5Q9GZQ3 224 aa10.6□□□□□ -0.71
PTPRF-205ENST00000414879 ANKRD34BA5PLL1 514 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 C1orf196B1AJZ1 125 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 TGM1P22735 817 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 OR2Z1Q8NG97 314 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 OR4C16Q8NGL9 310 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 NRTNQ99748 197 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 LPAR3Q9UBY5 353 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 TMED3Q9Y3Q3 217 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 PDCD11Q14690 1871 aaKnown RBP10.59□□□□□ -0.71
PTPRF-205ENST00000414879 A0A1W2PQM1 296 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 EFSO43281 561 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 NDUFB6O95139 128 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 HLA-HP01893 362 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 ASCL5Q7RTU5 278 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 OR5A2Q8NGI9 324 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 SPACA5Q96QH8 159 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 PRSS27Q9BQR3 290 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 ZNF649Q9BS31 505 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 TMEM165Q9HC07 324 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 AMMECR1Q9Y4X0 333 aaPredicted RBP10.59□□□□□ -0.71
PTPRF-205ENST00000414879 HS3ST3B1Q9Y662 390 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 A0A0B4J2A0 478 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 OR4C45A6NMZ5 311 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 IFNL4K9M1U5 179 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 LGALS8O00214 317 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 HRASP01112 189 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 CRHP06850 196 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 DEFA4P12838 97 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 LIMS1P48059 325 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 TNFAIP6P98066 277 aaPredicted RBP10.59□□□□□ -0.71
PTPRF-205ENST00000414879 SNTB1Q13884 538 aaKnown RBP10.59□□□□□ -0.71
PTPRF-205ENST00000414879 OR2T2Q6IF00 324 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 MS4A5Q9H3V2 200 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 SHPKQ9UHJ6 478 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 CYB5R1Q9UHQ9 305 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 TRAV38-1A0A0B4J264 116 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 TAS2R45P59539 299 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 MPPED2Q15777 294 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 TMUB2Q71RG4 321 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 TUSC5Q8IXB3 177 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 DDOQ99489 341 aa10.59□□□□□ -0.71
PTPRF-205ENST00000414879 A0A0U1RQV5 110 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 CTAG2O75638 210 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 NGFP01138 241 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 VMA21Q3ZAQ7 101 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 C1orf185Q5T7R7 199 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 OR10P1Q8NGE3 313 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 OR8B12Q8NGG6 310 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 TMEM272A0A1B0GTI8 110 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 PRR33A8MZF0 331 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 J3QW42 95 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 CDC14BO60729 498 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 FBXO24O75426 580 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 IGKV1D-16P01601 117 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 DTYMKP23919 212 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 PIGPP57054 158 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 TMEM268Q5VZI3 342 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 DEFB108BQ8NET1 73 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 WNT2BQ93097 391 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 PINX1Q96BK5 328 aaKnown RBP10.58□□□□□ -0.72
PTPRF-205ENST00000414879 CMBLQ96DG6 245 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 FBXO17Q96EF6 278 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 SDSLQ96GA7 329 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 HPNP05981 417 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 SERPINF1P36955 418 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 PXT1Q8NFP0 134 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 TRMT61AQ96FX7 289 aaKnown RBP10.58□□□□□ -0.72
PTPRF-205ENST00000414879 OR5V1Q9UGF6 321 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 ATPIF1Q9UII2 106 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 DTX4Q9Y2E6 619 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 PCYT1BQ9Y5K3 369 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-205ENST00000414879 PNPP00491 289 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 PSMB3P49720 205 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 C17orf78Q8N4C9 275 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 POC1BQ8TC44 478 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 FKBP11Q9NYL4 201 aa10.58□□□□□ -0.72
PTPRF-205ENST00000414879 J3QT63 122 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 IGKV3-11P04433 115 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 CEACAM1P13688 526 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 CEACAM3P40198 252 aa10.57□□□□□ -0.72
PTPRF-205ENST00000414879 SLC16A12Q6ZSM3 486 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms