RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 COMMD7Q86VX2 200 aa13.34□□□□□ -0.27
LRCH3-202ENST00000414675 PECRQ9BY49 303 aa13.34□□□□□ -0.27
LRCH3-202ENST00000414675 ZNF581Q9P0T4 197 aa13.34□□□□□ -0.27
LRCH3-202ENST00000414675 F5H5P2 479 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 CCL2P13500 99 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 CXCL2P19875 107 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 CD82P27701 267 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 IKZF1Q13422 519 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 ARFRP1Q13795 201 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 LY6G6FQ5SQ64 297 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 C12orf45Q8N5I9 185 aaPredicted RBP13.33□□□□□ -0.28
LRCH3-202ENST00000414675 ST8SIA4Q92187 359 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 SPSB1Q96BD6 273 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 APH1AQ96BI3 265 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 S100A13Q99584 98 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 OCSTAMPQ9BR26 566 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 LRFN3Q9BTN0 628 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 C1QTNF5Q9BXJ0 243 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 TMPRSS13Q9BYE2 586 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 ZNF230Q9UIE0 474 aaPredicted RBP13.33□□□□□ -0.28
LRCH3-202ENST00000414675 TNRC6AQ8NDV7 1962 aaKnown RBP13.33□□□□□ -0.28
LRCH3-202ENST00000414675 CAMK2BQ13554 666 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 CLVS2Q5SYC1 327 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 SLC25A42Q86VD7 318 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 ADAD2Q8NCV1 583 aaKnown RBP13.33□□□□□ -0.28
LRCH3-202ENST00000414675 STEAP2Q8NFT2 490 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 WDYHV1Q96HA8 205 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 RNF122Q9H9V4 155 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.33□□□□□ -0.28
LRCH3-202ENST00000414675 AUP1Q9Y679 476 aa13.33□□□□□ -0.28
LRCH3-202ENST00000414675 RIF1Q5UIP0 2472 aaKnown RBP13.33□□□□□ -0.28
LRCH3-202ENST00000414675 RPS10-NUDT3A0A1W2PQS6 291 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 CRYZL1O95825 349 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 ACTL6AO96019 429 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 NRASP01111 189 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 TBPP20226 339 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 SOX8P57073 446 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 ZMYND11Q15326 602 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 OR8B8Q15620 311 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 FAM189A2Q15884 450 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 C3P1Q6ZMU1 363 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 COLCA1Q6ZS62 124 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 C17orf50Q8WW18 174 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 Q96M66 194 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 LDAHQ9H6V9 325 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 PRSS50Q9UI38 385 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 FXYD6-FXYD2A0A087WZ82 144 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 MCRIP1C9JLW8 97 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 I3L521 148 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 ARPC5O15511 151 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 IFNA6P05013 189 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 GABRR1P24046 479 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 ZBTB25P24278 435 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 TNFSF10P50591 281 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 SEC61A1P61619 476 aaKnown RBP13.32□□□□□ -0.28
LRCH3-202ENST00000414675 PPP1R1AQ13522 171 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 CNN3Q15417 329 aaKnown RBP13.32□□□□□ -0.28
LRCH3-202ENST00000414675 SIGIRRQ6IA17 410 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 C6orf201Q7Z4U5 140 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 ZNF100Q8IYN0 542 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 ZDHHC22Q8N966 263 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 NAXEQ8NCW5 288 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 SPSB4Q96A44 273 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 ST6GALNAC5Q9BVH7 336 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 PRDM14Q9GZV8 571 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 FXYD6Q9H0Q3 95 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 RGCCQ9H4X1 137 aa13.32□□□□□ -0.28
LRCH3-202ENST00000414675 TRGV5A0A0B4J1U4 118 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 IGKV1-12A0A0C4DH73 117 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 MSTNO14793 375 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 HTR3BO95264 441 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 IGKV1D-12P01611 117 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 HLA-AP01891 365 aaKnown RBP13.31□□□□□ -0.28
LRCH3-202ENST00000414675 CCNOP22674 350 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 PRKACBP22694 351 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 CPT2P23786 658 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 CCL11P51671 97 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 AP2S1P53680 142 aaPredicted RBP13.31□□□□□ -0.28
LRCH3-202ENST00000414675 RNPS1Q15287 305 aaKnown RBP13.31□□□□□ -0.28
LRCH3-202ENST00000414675 HOGA1Q86XE5 327 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 MARCH1Q8TCQ1 289 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 GSX2Q9BZM3 304 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 C12orf49Q9H741 205 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 CRIM1Q9NZV1 1036 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 ZNF391Q9UJN7 358 aa13.31□□□□□ -0.28
LRCH3-202ENST00000414675 RGS11O94810 467 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 RBP2P50120 134 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 RRADP55042 308 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 MPPED2Q15777 294 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 STK11Q15831 433 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 VAX1Q5SQQ9 334 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 MCEMP1Q8IX19 187 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 FDCSPQ8NFU4 85 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 PIGCQ92535 297 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 BORCS8Q96FH0 119 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 HDHD3Q9BSH5 251 aaPredicted RBP13.3□□□□□ -0.28
LRCH3-202ENST00000414675 ZDHHC11Q9H8X9 412 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 IGKV1D-8A0A087WSZ0 117 aa13.3□□□□□ -0.28
LRCH3-202ENST00000414675 OR6C65A6NJZ3 312 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms