RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 H2BFMP0C1H6 154 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 HTR2BP41595 481 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 HIST1H3AP68431 136 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 GLYATL3Q5SZD4 288 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 HIST2H3PS2Q5TEC6 136 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 TMEM244Q5VVB8 128 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 HIST2H3AQ71DI3 136 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 CCDC36Q8IYA8 594 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 LRRC18Q8N456 261 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 C17orf78Q8N4C9 275 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 OR10H5Q8NGA6 315 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 OR4C16Q8NGL9 310 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 SNAPC3Q92966 411 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 RNASE6Q93091 150 aaKnown RBP8.62□□□□□ -1.03
DDB1-202ENST00000414411 MED30Q96HR3 178 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 ZNF436Q9C0F3 470 aaPredicted RBP8.62□□□□□ -1.03
DDB1-202ENST00000414411 CENPMQ9NSP4 180 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 FAM206AQ9NX38 181 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 CGGBP1Q9UFW8 167 aaPredicted RBP8.62□□□□□ -1.03
DDB1-202ENST00000414411 SLC23A1Q9UHI7 598 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 SCP2D1Q9UJQ7 156 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 LOC390937A0A1W2PQ73 354 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 OR5H1A6NKK0 313 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 DOK2O60496 412 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 ALX3O95076 343 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 FARS2O95363 451 aaKnown RBP8.62□□□□□ -1.03
DDB1-202ENST00000414411 IL5P05113 134 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 RNF224P0DH78 156 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 ANXA7P20073 488 aaKnown RBP8.62□□□□□ -1.03
DDB1-202ENST00000414411 PRSS3P35030 304 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 SSBP1Q04837 148 aaKnown RBP8.62□□□□□ -1.03
DDB1-202ENST00000414411 RBMS2Q15434 407 aaKnown RBP8.62□□□□□ -1.03
DDB1-202ENST00000414411 TIMM23BQ5SRD1 257 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 LIAT1Q6ZQX7 453 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 SLC16A14Q7RTX9 510 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.62□□□□□ -1.03
DDB1-202ENST00000414411 STEAP2Q8NFT2 490 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 OR10S1Q8NGN2 331 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 S100PBPQ96BU1 408 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 SLAMF6Q96DU3 332 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 ZNF75AQ96N20 296 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 SEC22CQ9BRL7 303 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 ATG5Q9H1Y0 275 aa8.62□□□□□ -1.03
DDB1-202ENST00000414411 HEATR1Q9H583 2144 aaKnown RBP8.61□□□□□ -1.03
DDB1-202ENST00000414411 SNRPGP15A8MWD9 76 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 G3V3Q6 166 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 P2RY10O00398 339 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 LDLRAD4O15165 306 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 CREBL2O60519 120 aaPredicted RBP8.61□□□□□ -1.03
DDB1-202ENST00000414411 LMX1BO60663 402 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 HLA-HP01893 362 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 TTRP02766 147 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 ACSM4P0C7M7 580 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 PATE4P0C8F1 98 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 PF4V1P10720 104 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 IL32P24001 234 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 DNASE1P24855 282 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 GRNP28799 593 aaKnown RBP8.61□□□□□ -1.03
DDB1-202ENST00000414411 SPOCK1Q08629 439 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 C1orf100Q5SVJ3 147 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 ZNF626Q68DY1 528 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 NLRC3Q7RTR2 1065 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 DPPA2Q7Z7J5 298 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 LYPD6Q86Y78 171 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 OR4D10Q8NGI6 311 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 OR2T35Q8NGX2 323 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 GPX8Q8TED1 209 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 C1orf198Q9H425 327 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 METTL17Q9H7H0 456 aaPredicted RBP8.61□□□□□ -1.03
DDB1-202ENST00000414411 GPN1Q9HCN4 374 aaPredicted RBP8.61□□□□□ -1.03
DDB1-202ENST00000414411 OBP2BQ9NPH6 170 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 ASH2LQ9UBL3 628 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 RHBDD3Q9Y3P4 386 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 SLC25A15Q9Y619 301 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 DCHS2Q6V1P9 2916 aa8.61□□□□□ -1.03
DDB1-202ENST00000414411 ABCA4P78363 2273 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 SULT1C2O00338 296 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 AGFG2O95081 481 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 AKAIN1P0CW23 69 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 GTF2F2P13984 249 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 ZNF32P17041 273 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 ACTBP60709 375 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 ACTG1P63261 375 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 SORDQ00796 357 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 PSG4Q00888 419 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 CFAP77Q6ZQR2 320 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 RHOUQ7L0Q8 258 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 ELMOD2Q8IZ81 293 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 SPICQ8N5J4 248 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 JAGN1Q8N5M9 183 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 PTX4Q96A99 478 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 GINS4Q9BRT9 223 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 PNRC2Q9NPJ4 139 aaKnown RBP8.6□□□□□ -1.03
DDB1-202ENST00000414411 GDF2Q9UK05 429 aaPredicted RBP8.6□□□□□ -1.03
DDB1-202ENST00000414411 TIMM10BQ9Y5J6 103 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 ICE1Q9Y2F5 2266 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 ROS1P08922 2347 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 A0A0A6YYH2 397 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 A0A1W2PR80 420 aa8.6□□□□□ -1.03
DDB1-202ENST00000414411 MEIS3P1A6NDR6 274 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms