RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 MAB21L2Q9Y586 359 aa7.8□□□□□ -1.16
RFFL-203ENST00000413582 hCG_1807616A0A1W2PRN6 198 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 MEIOCA2RUB1 952 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 A6NLC8 198 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 CD300LBA8K4G0 201 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 ADARB2-AS1A8MUL3 147 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 DCTN6O00399 190 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 PRODHO43272 600 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 PRKYO43930 277 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 GMDSO60547 372 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 FBXO24O75426 580 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 RENP00797 406 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 LHBP01229 141 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 LYNP07948 512 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 VSIG10L2P0DP72 767 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 PIPP12273 146 aaPredicted RBP7.79□□□□□ -1.16
RFFL-203ENST00000413582 HIST1H1CP16403 213 aaKnown RBP7.79□□□□□ -1.16
RFFL-203ENST00000413582 CRHBPP24387 322 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 CDKN2AP42771 156 aaKnown RBP7.79□□□□□ -1.16
RFFL-203ENST00000413582 SLC25A1P53007 311 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 MALLQ13021 153 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 PCK2Q16822 640 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 WDR38Q5JTN6 314 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 SLC35D3Q5M8T2 416 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 LAIR2Q6ISS4 152 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 CRIP3Q6Q6R5 217 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 MRPL21Q7Z2W9 205 aaKnown RBP7.79□□□□□ -1.16
RFFL-203ENST00000413582 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.79□□□□□ -1.16
RFFL-203ENST00000413582 CMTM4Q8IZR5 234 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 SDR9C7Q8NEX9 313 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 C17orf50Q8WW18 174 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 APH1BQ8WW43 257 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 IL4I1Q96RQ9 567 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 DUSP21Q9H596 190 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 HAO2Q9NYQ3 351 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 DNAJB11Q9UBS4 358 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 WARS2Q9UGM6 360 aaKnown RBP7.79□□□□□ -1.16
RFFL-203ENST00000413582 DNAH9Q9NYC9 4486 aa7.79□□□□□ -1.16
RFFL-203ENST00000413582 IGLV1-36A0A0B4J1U3 117 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 OR6C68A6NDL8 312 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 EFCAB10A6NFE3 127 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 F5H5K5 113 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.78□□□□□ -1.16
RFFL-203ENST00000413582 SLC1A7O00341 560 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 CHST1O43916 411 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 LCATP04180 440 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 CD28P10747 220 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 HTR1FP30939 366 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 SLC15A1P46059 708 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 UBE2E1P51965 193 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 BLVRAP53004 296 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 ZNF92Q03936 586 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.78□□□□□ -1.16
RFFL-203ENST00000413582 ACSM1Q08AH1 577 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 LY6EQ16553 131 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 SNAI3Q3KNW1 292 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 KLHL22Q53GT1 634 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 SLC35F1Q5T1Q4 408 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 SLC18B1Q6NT16 456 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 CCBE1Q6UXH8 406 aaPredicted RBP7.78□□□□□ -1.16
RFFL-203ENST00000413582 MEPCEQ7L2J0 689 aaKnown RBP7.78□□□□□ -1.16
RFFL-203ENST00000413582 NAA40Q86UY6 237 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 NDUFA11Q86Y39 141 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 CPOQ8IVL8 374 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 LINC00346Q8IVM7 164 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 SLC37A3Q8NCC5 494 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 BPIFB6Q8NFQ5 453 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 OR4F17Q8NGA8 305 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 OR4K13Q8NH42 304 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 C8orf46Q8TAG6 207 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 CNIH3Q8TBE1 160 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 WIPF2Q8TF74 440 aaPredicted RBP7.78□□□□□ -1.16
RFFL-203ENST00000413582 MYDGFQ969H8 173 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 R3HDM4Q96D70 268 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 AJUBAQ96IF1 538 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 WWC2-AS2Q96NR7 200 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 TSSK2Q96PF2 358 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 OR4F4Q96R69 305 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 NMNAT3Q96T66 252 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 CCL13Q99616 98 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 SSX3Q99909 188 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 ATF6BQ99941 703 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 DCTN5Q9BTE1 182 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 NMNAT2Q9BZQ4 307 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 PNRC2Q9NPJ4 139 aaKnown RBP7.78□□□□□ -1.16
RFFL-203ENST00000413582 FKBP14Q9NWM8 211 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 MRPL15Q9P015 296 aaKnown RBP7.78□□□□□ -1.16
RFFL-203ENST00000413582 PSORS1C1Q9UIG5 152 aa7.78□□□□□ -1.16
RFFL-203ENST00000413582 A0A087WXM4 84 aa7.77□□□□□ -1.17
RFFL-203ENST00000413582 TRIM64CA6NLI5 447 aa7.77□□□□□ -1.17
RFFL-203ENST00000413582 ENTPD6O75354 484 aa7.77□□□□□ -1.17
RFFL-203ENST00000413582 GRPP07492 148 aa7.77□□□□□ -1.17
RFFL-203ENST00000413582 RPSAP08865 295 aaKnown RBP7.77□□□□□ -1.17
RFFL-203ENST00000413582 SELLP14151 372 aa7.77□□□□□ -1.17
RFFL-203ENST00000413582 MUC1P15941 1255 aaPredicted RBP7.77□□□□□ -1.17
RFFL-203ENST00000413582 AMY2BP19961 511 aa7.77□□□□□ -1.17
RFFL-203ENST00000413582 CRABP1P29762 137 aa7.77□□□□□ -1.17
RFFL-203ENST00000413582 SLC35A2P78381 396 aa7.77□□□□□ -1.17
RFFL-203ENST00000413582 RAB40BQ12829 278 aa7.77□□□□□ -1.17
RFFL-203ENST00000413582 ECH1Q13011 328 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms