RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 MSX2P35548 267 aaPredicted RBP9.81□□□□□ -0.84
LIMS2-210ENST00000413578 DLX6P56179 175 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 ERVFRD-1P60508 538 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 LDLRAD2Q5SZI1 272 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 KCTD8Q6ZWB6 473 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 SHFQ7M4L6 423 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 THAP5Q7Z6K1 395 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 ERI1Q8IV48 349 aaKnown RBP9.81□□□□□ -0.84
LIMS2-210ENST00000413578 AQP11Q8NBQ7 271 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 OR8B12Q8NGG6 310 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 OTOSQ8NHW6 89 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 NKX3-1Q99801 234 aaPredicted RBP9.81□□□□□ -0.84
LIMS2-210ENST00000413578 DGCR6LQ9BY27 220 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 MED20Q9H944 212 aa9.81□□□□□ -0.84
LIMS2-210ENST00000413578 FAM183AA6NL82 134 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 RIIAD1A6NNX1 92 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 CCNB2O95067 398 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 IFNGP01579 166 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 H2BFMP0C1H6 154 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 CCL3L1P16619 93 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 ZNF3P17036 446 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 PSMA6P60900 246 aaKnown RBP9.8□□□□□ -0.84
LIMS2-210ENST00000413578 RPL31P62899 125 aaKnown RBP9.8□□□□□ -0.84
LIMS2-210ENST00000413578 GNG3P63215 75 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 CD83Q01151 205 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 ZNF273Q14593 569 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 CNN3Q15417 329 aaKnown RBP9.8□□□□□ -0.84
LIMS2-210ENST00000413578 CEACAM21Q3KPI0 293 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 CD300LDQ6UXZ3 194 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 ACP7Q6ZNF0 438 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 Q6ZS46 218 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 CPLX4Q7Z7G2 160 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 VNN3Q9NY84 501 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 RASL12Q9NYN1 266 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 COL7A1Q02388 2944 aa9.8□□□□□ -0.84
LIMS2-210ENST00000413578 RYR2Q92736 4967 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 OR5B21A6NL26 309 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 RFPL4AA6NLU0 287 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 C17orf98A8MV24 154 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 ZNF732B4DXR9 585 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 RFPL4AL1F8VTS6 287 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 IGLV3-1P01715 115 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 LYNP07948 512 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 IGLL1P15814 213 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 COX7A1P24310 79 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 RAB13P51153 203 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 DYNLT3P51808 116 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 PPP1R8Q12972 351 aaKnown RBP9.79□□□□□ -0.84
LIMS2-210ENST00000413578 SAMD4BQ5PRF9 694 aaKnown RBP9.79□□□□□ -0.84
LIMS2-210ENST00000413578 ZBTB37Q5TC79 503 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 C11orf87Q6NUJ2 197 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 TRPM8Q7Z2W7 1104 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 CALHM1Q8IU99 346 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 PGAM4Q8N0Y7 254 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 ZNF561Q8N587 486 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 ZNF454Q8N9F8 522 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 POC1AQ8NBT0 407 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 OR5A2Q8NGI9 324 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 ZNF671Q8TAW3 534 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 ITFG2Q969R8 447 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 HIST1H2AAQ96QV6 131 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 OCSTAMPQ9BR26 566 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 ARGLU1Q9NWB6 273 aaPredicted RBP9.79□□□□□ -0.84
LIMS2-210ENST00000413578 USE1Q9NZ43 259 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 KLHDC2Q9Y2U9 406 aa9.79□□□□□ -0.84
LIMS2-210ENST00000413578 TBL2Q9Y4P3 447 aaKnown RBP9.79□□□□□ -0.84
LIMS2-210ENST00000413578 A0A0U1RQV5 110 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 A0A1W2PPH5 198 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 SELENOFO60613 162 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 NOS1APO75052 506 aaPredicted RBP9.78□□□□□ -0.84
LIMS2-210ENST00000413578 MPIG6BO95866 241 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 PGA5P0DJD9 388 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 FAHP16930 419 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 PAICSP22234 425 aaKnown RBP9.78□□□□□ -0.84
LIMS2-210ENST00000413578 PRDX2P32119 198 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 CAPZA1P52907 286 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 LGALS4P56470 323 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 MICAQ29983 383 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 SMIM21Q3B7S5 101 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 DMRTC1Q5HYR2 192 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 CEP78Q5JTW2 689 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 ZNF626Q68DY1 528 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 HAGHLQ6PII5 290 aaPredicted RBP9.78□□□□□ -0.84
LIMS2-210ENST00000413578 ZNF782Q6ZMW2 699 aaPredicted RBP9.78□□□□□ -0.84
LIMS2-210ENST00000413578 TMEM219Q86XT9 240 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 IQCF1Q8N6M8 205 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 OR11H6Q8NGC7 330 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 OR4M1Q8NGD0 313 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 RPS4Y2Q8TD47 263 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 MALSU1Q96EH3 234 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 ZNF488Q96MN9 340 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 OR8B4Q96RC9 309 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 CDRT15Q96T59 188 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 PRSS22Q9GZN4 317 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 NIPAL2Q9H841 368 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 HES4Q9HCC6 221 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 FAM206AQ9NX38 181 aa9.78□□□□□ -0.84
LIMS2-210ENST00000413578 TCRBV5S2A0A599 114 aa9.77□□□□□ -0.85
LIMS2-210ENST00000413578 ACOD1A6NK06 481 aa9.77□□□□□ -0.85
LIMS2-210ENST00000413578 SLC1A7O00341 560 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms