RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TMEM50BP56557 158 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 DAOAP59103 153 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SKP1P63208 163 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 PITPNAQ00169 270 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 CDK5Q00535 292 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 BEX3Q00994 111 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 NAAAQ02083 359 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 GLO1Q04760 184 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 BCL2L1Q07817 233 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 PJVKQ0ZLH3 352 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SKP2Q13309 424 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 BIKQ13323 160 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SNTB2Q13425 540 aaKnown RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR2F1Q13607 317 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 C1DQ13901 141 aaKnown RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 DOC2AQ14183 400 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 ABRAXAS2Q15018 415 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 EXOSC7Q15024 291 aaKnown RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 RAB35Q15286 201 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SURF2Q15527 256 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR8G1Q15617 311 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 MLF2Q15773 248 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 TOMM34Q15785 309 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 FAM189A2Q15884 450 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 NDUFA9Q16795 377 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 UPP1Q16831 310 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 CHRFAM7AQ494W8 412 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 LY6G6FQ5SQ64 297 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 C9orf64Q5T6V5 341 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 ARMC12Q5T9G4 340 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 RIPPLY2Q5TAB7 128 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 CYB5R2Q6BCY4 276 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 RTL6Q6ICC9 239 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR52W1Q6IF63 320 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 ACSM5Q6NUN0 579 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 H3F3CQ6NXT2 135 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SMARCD3Q6STE5 483 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SCIMPQ6UWF3 145 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 LRRN1Q6UXK5 716 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 TPGS1Q6ZTW0 290 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SLC16A14Q7RTX9 510 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SCD5Q86SK9 330 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 C9orf40Q8IXQ3 194 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 HIST3H2BBQ8N257 126 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 TRAM1L1Q8N609 369 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 KRTCAP2Q8N6L1 136 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 NPWQ8N729 165 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 LRRC52Q8N7C0 313 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 CCDC54Q8NEL0 328 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SLC30A7Q8NEW0 376 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR2L5Q8NG80 312 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR13C8Q8NGS7 320 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR9A2Q8NGT5 310 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR2G2Q8NGZ5 317 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR2L2Q8NH16 312 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 UBA3Q8TBC4 463 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 TRMT10AQ8TBZ6 339 aaKnown RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SPPL2AQ8TCT8 520 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 RNASEH2CQ8TDP1 164 aaKnown RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 FAM151AQ8WW52 585 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 ACOT11Q8WXI4 607 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 CNRIP1Q96F85 164 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 CMTM7Q96FZ5 175 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 MED8Q96G25 268 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 FAM210BQ96KR6 192 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 ALKBH3Q96Q83 286 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR5B2Q96R09 309 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR52E6Q96RD3 313 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 TAAR6Q96RI8 345 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 CLCC1Q96S66 551 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 MRPL45Q9BRJ2 306 aaKnown RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 TMEM208Q9BTX3 173 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 DUSP16Q9BY84 665 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 ACTR3CQ9C0K3 210 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 MFFQ9GZY8 342 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 ARL6Q9H0F7 186 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 HDHD2Q9H0R4 259 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SIRPDQ9H106 197 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 POLR3FQ9H1D9 316 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 XKR8Q9H6D3 395 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 PTGES2Q9H7Z7 377 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 TMEM27Q9HBJ8 222 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SPACA1Q9HBV2 294 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 MMP26Q9NRE1 261 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 STOX2Q9P2F5 926 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 KLK13Q9UKR3 277 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 UBQLN1Q9UMX0 589 aaKnown RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 TNFSF18Q9UNG2 199 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 FLVCR2Q9UPI3 526 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 MOKQ9UQ07 419 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 SLC9A8Q9Y2E8 581 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 EXOSC1Q9Y3B2 195 aaKnown RBP1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 GOLT1BQ9Y3E0 138 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 DOCK1Q14185 1865 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 LTBP4Q8N2S1 1624 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 STRCQ7RTU9 1775 aa1.98□□□□□ -2.09
HMGB3P2-201ENST00000411913 BTAF1O14981 1849 aa1.97□□□□□ -2.09
HMGB3P2-201ENST00000411913 TSC2P49815 1807 aa1.97□□□□□ -2.09
HMGB3P2-201ENST00000411913 PARP14Q460N5 1801 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms