RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 OR4F17Q8NGA8 305 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 LRRC29Q8WV35 223 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 CXorf58Q96LI9 332 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 AMMECR1Q9Y4X0 333 aaPredicted RBP16.4■□□□□ 0.22
HCG11-201ENST00000411553 CACNA1SQ13698 1873 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 BCL2L11O43521 198 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 LYZL6O75951 148 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 LRRTM1Q86UE6 522 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 C2CD4CQ8TF44 421 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 RAB1BQ9H0U4 201 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 ZNF71Q9NQZ8 489 aaPredicted RBP16.4■□□□□ 0.22
HCG11-201ENST00000411553 ICAM5Q9UMF0 924 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 TRIM77I1YAP6 450 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 MASP2O00187 686 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 PRRX1P54821 245 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 ZNF574Q6ZN55 896 aaPredicted RBP16.4■□□□□ 0.22
HCG11-201ENST00000411553 WDR89Q96FK6 387 aaPredicted RBP16.4■□□□□ 0.22
HCG11-201ENST00000411553 PSG11Q9UQ72 335 aa16.4■□□□□ 0.22
HCG11-201ENST00000411553 LSM2Q9Y333 95 aaKnown RBP16.4■□□□□ 0.22
HCG11-201ENST00000411553 COL9A1P20849 921 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 LIMK1P53667 647 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 HTRA4P83105 476 aaPredicted RBP16.39■□□□□ 0.21
HCG11-201ENST00000411553 PRRX2Q99811 253 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 SLC17A5Q9NRA2 495 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 KCNE1BA0A087WTH5 132 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 ACSM6Q6P461 480 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 NUFIP2Q7Z417 695 aaKnown RBP16.39■□□□□ 0.21
HCG11-201ENST00000411553 LINC01555Q8NAE3 123 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 A0A1B0GUL6 1792 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 CPN1P15169 458 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 ERVFC1-1P60608 527 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 PPP1CBP62140 327 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 SH2D5Q6ZV89 423 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 NPEPL1Q8NDH3 523 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 ZDHHC11Q9H8X9 412 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 SLC2A8Q9NY64 477 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 ERRFI1Q9UJM3 462 aaPredicted RBP16.39■□□□□ 0.21
HCG11-201ENST00000411553 A0A1W2PPQ1 181 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 GPANK1O95872 356 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 FGF2P09038 288 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 ACSM4P0C7M7 580 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 OR2B8PP59922 312 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 PRSS41Q7RTY9 318 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 GLCCI1Q86VQ1 547 aa16.39■□□□□ 0.21
HCG11-201ENST00000411553 WDR61Q9GZS3 305 aaKnown RBP16.39■□□□□ 0.21
HCG11-201ENST00000411553 hADV38S2A0JD32 116 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 BTNL3Q6UXE8 466 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 RFESDQ8TAC1 157 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 ARHGAP5-AS1Q96IT6 56 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 COX7A1P24310 79 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 PTGFRP43088 359 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 TAGLNQ01995 201 aaKnown RBP16.38■□□□□ 0.21
HCG11-201ENST00000411553 CLEC12BQ2HXU8 276 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 NHLRC1Q6VVB1 395 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 NEIL1Q96FI4 390 aaPredicted RBP16.38■□□□□ 0.21
HCG11-201ENST00000411553 UQCC1Q9NVA1 299 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 ALS2Q96Q42 1657 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 TCAPO15273 167 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 KIR2DS2P43631 304 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 MRGPREQ86SM8 312 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 GRAMD2BQ96HH9 432 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 TSPAN32Q96QS1 320 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 RHNO1Q9BSD3 238 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 SERTM1A2A2V5 107 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 CEACAM3P40198 252 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 LPAR6P43657 344 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 FAM3AP98173 230 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 C20orf196Q8IYI0 205 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 SRRQ9GZT4 340 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 SMOC1Q9H4F8 434 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 C20orf141Q9NUB4 165 aa16.38■□□□□ 0.21
HCG11-201ENST00000411553 RPL13AP40429 203 aaKnown RBP16.37■□□□□ 0.21
HCG11-201ENST00000411553 OR2M7Q8NG81 312 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 C10orf90Q96M02 699 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 FKBP11Q9NYL4 201 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 LY86O95711 162 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 HIST1H1DP16402 221 aaKnown RBP16.37■□□□□ 0.21
HCG11-201ENST00000411553 PWWP2BQ6NUJ5 590 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 SSX7Q7RTT5 188 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 OR2I1PQ8NGU4 316 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 ST8SIA2Q92186 375 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 LHX9Q9NQ69 397 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 NIT2Q9NQR4 276 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.37■□□□□ 0.21
HCG11-201ENST00000411553 CNTRLQ7Z7A1 2325 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 PYCARD-AS1I3L0S3 204 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 PAX5Q02548 391 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 SP6Q3SY56 376 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 DEGS2Q6QHC5 323 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 CT55Q8WUE5 264 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 RAB1CQ92928 201 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 TOX3O15405 576 aaPredicted RBP16.37■□□□□ 0.21
HCG11-201ENST00000411553 TOX4O94842 621 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 ONECUT2O95948 504 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 OR3A4PP47883 348 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 PTTG1IPP53801 180 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 Q3ZCU0 254 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 AMER3Q8N944 861 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 LURAP1Q96LR2 239 aa16.37■□□□□ 0.21
HCG11-201ENST00000411553 CD3EP07766 207 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms