RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 UGT2A3Q6UWM9 527 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 DPY19L2P2Q6ZN68 376 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 NANOGNBQ7Z5D8 188 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 WDFY1Q8IWB7 410 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 Q8N377 158 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 TMEM99Q8N816 258 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 ZNF555Q8NEP9 628 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 ATP6V1C2Q8NEY4 427 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 OR2T33Q8NG76 320 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 OR52L1Q8NGH7 329 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 OR8J1Q8NGP2 316 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 OR51A7Q8NH64 312 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 OR10D3Q8NH80 312 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 OR2V1Q8NHB1 315 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 RHOXF1Q8NHV9 184 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 TEX47Q8TBZ9 253 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 TRUB1Q8WWH5 349 aaKnown RBP3.45□□□□□ -1.86
CLK1-203ENST00000409769 CYGBQ8WWM9 190 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 SLC25A36Q96CQ1 311 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 DNAJA3Q96EY1 480 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 GPR137Q96N19 417 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 TSPAN32Q96QS1 320 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 APOL4Q9BPW4 351 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 TAPBPLQ9BX59 468 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 DEFB127Q9H1M4 99 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 TXNIPQ9H3M7 391 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 Q9H521 79 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 FKBP14Q9NWM8 211 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 IL20RAQ9UHF4 553 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 BAIAP2Q9UQB8 552 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 RNF6Q9Y252 685 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 GMPPBQ9Y5P6 360 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 RTTNQ86VV8 2226 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 PIEZO2Q9H5I5 2752 aa3.45□□□□□ -1.86
CLK1-203ENST00000409769 MYO7BQ6PIF6 2116 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 NBASA2RRP1 2371 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 A0A1B0GTH9 108 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 IQCMA0A1B0GVH7 501 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 CCDC182A6NF36 153 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 ZNF716A6NP11 495 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 NPIPA5E9PKD4 350 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 M0R129 80 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 CXCL13O43927 109 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 MPZL2O60487 215 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 EIF1BO60739 113 aaKnown RBP3.44□□□□□ -1.86
CLK1-203ENST00000409769 VAMP5O95183 116 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 SLC2A10O95528 541 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 HMGN1P05114 100 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 ADORA3P0DMS8 318 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 HIST1H1CP16403 213 aaKnown RBP3.44□□□□□ -1.86
CLK1-203ENST00000409769 SLC2A5P22732 501 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 GTF2E2P29084 291 aaKnown RBP3.44□□□□□ -1.86
CLK1-203ENST00000409769 RPL4P36578 427 aaKnown RBP3.44□□□□□ -1.86
CLK1-203ENST00000409769 OR3A3P47888 321 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 CARD18P57730 90 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 OR2B6P58173 313 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 CDC42P60953 191 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 RPL27P61353 136 aaKnown RBP3.44□□□□□ -1.86
CLK1-203ENST00000409769 ERVK-16P61578 105 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 ERVK-25P63136 954 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 PUDPQ08623 228 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 PMS2P3Q13401 168 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 SLC17A1Q14916 467 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 PDK3Q15120 406 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 GUSBP1Q15486 140 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 ACKR1Q16570 336 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 FAM106AQ4KMX7 169 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 LBHQ53QV2 105 aaPredicted RBP3.44□□□□□ -1.86
CLK1-203ENST00000409769 MESTQ5EB52 335 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 LINC01590Q5TEZ4 76 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 AADACL4Q5VUY2 407 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 NXNL2Q5VZ03 156 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 HBMQ6B0K9 141 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 BTNL8Q6UX41 500 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 CASP12Q6UXS9 341 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 C8orf59Q8N0T1 100 aaPredicted RBP3.44□□□□□ -1.86
CLK1-203ENST00000409769 KDM8Q8N371 416 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 C10orf53Q8N6V4 93 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 ARIH2OSQ8N7S6 290 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 TCEANCQ8N8B7 351 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 ZIC4Q8N9L1 334 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 OR4K13Q8NH42 304 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 CNIH3Q8TBE1 160 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 FAM81AQ8TBF8 368 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 ZPLD1Q8TCW7 415 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 PTP4A1Q93096 173 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 CPNE4Q96A23 557 aaPredicted RBP3.44□□□□□ -1.86
CLK1-203ENST00000409769 RASD2Q96D21 266 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 CNBD2Q96M20 576 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 Q96M85 177 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 FOXN4Q96NZ1 517 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 OXGR1Q96P68 337 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 ERMAPQ96PL5 475 aaPredicted RBP3.44□□□□□ -1.86
CLK1-203ENST00000409769 HCAR1Q9BXC0 346 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 NMNAT2Q9BZQ4 307 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 RNF122Q9H9V4 155 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 CMC2Q9NRP2 79 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 INIPQ9NRY2 104 aa3.44□□□□□ -1.86
CLK1-203ENST00000409769 PNPLA3Q9NST1 481 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms