RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CLINT1Q14677 625 aa13.62□□□□□ -0.23
LIMS2-205ENST00000409455 FAM189A2Q15884 450 aa13.62□□□□□ -0.23
LIMS2-205ENST00000409455 SSX9Q7RTT3 188 aa13.62□□□□□ -0.23
LIMS2-205ENST00000409455 LILRB2Q8N423 598 aa13.62□□□□□ -0.23
LIMS2-205ENST00000409455 CSNK2A3Q8NEV1 391 aa13.62□□□□□ -0.23
LIMS2-205ENST00000409455 GTF3AQ92664 365 aaKnown RBP13.62□□□□□ -0.23
LIMS2-205ENST00000409455 SPACA5Q96QH8 159 aa13.62□□□□□ -0.23
LIMS2-205ENST00000409455 FAM206AQ9NX38 181 aa13.62□□□□□ -0.23
LIMS2-205ENST00000409455 TMEM131Q92545 1883 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 UNC13CQ8NB66 2214 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 IFITM10A6NMD0 228 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 RAD51DO75771 328 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 CLPSP04118 112 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 GP1BBP13224 206 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 NDUFA6P56556 154 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 SURF2Q15527 256 aaPredicted RBP13.61□□□□□ -0.23
LIMS2-205ENST00000409455 TTLL10Q6ZVT0 673 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 ADAMTS18Q8TE60 1221 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 ARHGAP5-AS1Q96IT6 56 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 PBOV1Q9GZY1 135 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 NXF5Q9H1B4 397 aaKnown RBP13.61□□□□□ -0.23
LIMS2-205ENST00000409455 BANF2Q9H503 90 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 TUBD1Q9UJT1 453 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 SRPK3Q9UPE1 567 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 C17orf105B2RV13 164 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 PLPP3O14495 311 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 SCGB1D2O95969 90 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 FHITP49789 147 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 SNU13P55769 128 aaKnown RBP13.61□□□□□ -0.23
LIMS2-205ENST00000409455 SLC26A5P58743 744 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 TMEM151BQ8IW70 566 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 PNLDC1Q8NA58 520 aaKnown RBP13.61□□□□□ -0.23
LIMS2-205ENST00000409455 RNF133Q8WVZ7 376 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 ERGIC1Q969X5 290 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 S100PBPQ96BU1 408 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 GNRHR2Q96P88 292 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 OR11A1Q9GZK7 315 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 ARV1Q9H2C2 271 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 SUSD2Q9UGT4 822 aa13.61□□□□□ -0.23
LIMS2-205ENST00000409455 STRAPQ9Y3F4 350 aaKnown RBP13.61□□□□□ -0.23
LIMS2-205ENST00000409455 PUS1Q9Y606 427 aaKnown RBP eCLIP13.61□□□□□ -0.23
LIMS2-205ENST00000409455 ATXN8OSP0DMR3 200 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 SUCLG1P53597 346 aaKnown RBP13.6□□□□□ -0.23
LIMS2-205ENST00000409455 FMODQ06828 376 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 PCK2Q16822 640 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 SOHLH1Q5JUK2 328 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 LCN10Q6JVE6 187 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 METTL27Q8N6F8 245 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-205ENST00000409455 SUMF2Q8NBJ7 301 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 ZNF248Q8NDW4 579 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 LFNGQ8NES3 379 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 SLC25A43Q8WUT9 341 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-205ENST00000409455 RELTQ969Z4 430 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 C14orf144Q96I85 54 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 RHOVQ96L33 236 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 YPEL4Q96NS1 127 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 RTN4RQ9BZR6 473 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 DOK5Q9P104 306 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 TMEM184BQ9Y519 407 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-205ENST00000409455 RP1P56715 2156 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 CRTAPO75718 401 aaPredicted RBP13.6□□□□□ -0.23
LIMS2-205ENST00000409455 PGCP20142 388 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 PTGER4P35408 488 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 TMEM50BP56557 158 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 STX12Q86Y82 276 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 PLXDC1Q8IUK5 500 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 PRR22Q8IZ63 422 aa13.6□□□□□ -0.23
LIMS2-205ENST00000409455 URM1Q9BTM9 101 aaKnown RBP13.6□□□□□ -0.23
LIMS2-205ENST00000409455 DUX1O43812 170 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 HIST1H1BP16401 226 aaKnown RBP13.59□□□□□ -0.23
LIMS2-205ENST00000409455 EPHA8P29322 1005 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-205ENST00000409455 OR3A4PP47883 348 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 RBP2P50120 134 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 FOXK1P85037 733 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 HLA-BQ31612 363 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 CDPF1Q6NVV7 123 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 ZNF574Q6ZN55 896 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-205ENST00000409455 COMMD2Q86X83 199 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 SNIP1Q8TAD8 396 aaKnown RBP13.59□□□□□ -0.23
LIMS2-205ENST00000409455 MR1Q95460 341 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 MMABQ96EY8 250 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-205ENST00000409455 CHRNA10Q9GZZ6 450 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 MMP24Q9Y5R2 645 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 NCOR1O75376 2440 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 TMED7-TICAM2A0A0A6YYA0 188 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 A6NIZ1 184 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 E5RGE8 158 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 NSA2O95478 260 aaKnown RBP13.59□□□□□ -0.23
LIMS2-205ENST00000409455 P2RY1P47900 373 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 POLR2HP52434 150 aaKnown RBP13.59□□□□□ -0.23
LIMS2-205ENST00000409455 HSD17B7P56937 341 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 RAP1BP61224 184 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 HSD11B2P80365 405 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 CHRFAM7AQ494W8 412 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 SULF2Q8IWU5 870 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 SGPP2Q8IWX5 399 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 ZNF610Q8N9Z0 462 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 MFSD8Q8NHS3 518 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 MUCL1Q96DR8 90 aa13.59□□□□□ -0.23
LIMS2-205ENST00000409455 MARS2Q96GW9 593 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms