RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 HSPB2Q16082 182 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 AAED1Q7RTV5 226 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 GCNT2Q8N0V5 402 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF629Q9UEG4 869 aaPredicted RBP11.79□□□□□ -0.52
COL6A2-204ENST00000409416 TXNL1O43396 289 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 EPHA1P21709 976 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 ZBTB25P24278 435 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 LTC4SQ16873 150 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 CYB5R2Q6BCY4 276 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 P4HA3Q7Z4N8 544 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 SLC25A42Q86VD7 318 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 PAQR4Q8N4S7 273 aaPredicted RBP11.79□□□□□ -0.52
COL6A2-204ENST00000409416 SPSB2Q99619 263 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 FAM96BQ9Y3D0 163 aa11.79□□□□□ -0.52
COL6A2-204ENST00000409416 GTF3C1Q12789 2109 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 WIPF3A6NGB9 483 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 SNAPC5O75971 98 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 HLA-HP01893 362 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 S100A6P06703 90 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 CARD18P57730 90 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 MICBQ29980 383 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 ABCA11PQ4W5N1 156 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 SLC16A14Q7RTX9 510 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 CA5BP1Q8WTZ4 195 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 FAAP24Q9BTP7 215 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 TWSG1Q9GZX9 223 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 ADAMTS9Q9P2N4 1935 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 APOBEC1P41238 236 aaKnown RBP11.78□□□□□ -0.52
COL6A2-204ENST00000409416 RPS16P62249 146 aaKnown RBP11.78□□□□□ -0.52
COL6A2-204ENST00000409416 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 SLC23A3Q6PIS1 610 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 DNM1P46Q6ZS02 220 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF611Q8N823 705 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 OR5L1Q8NGL2 311 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 SUCNR1Q9BXA5 334 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 ALX4Q9H161 411 aaPredicted RBP11.78□□□□□ -0.52
COL6A2-204ENST00000409416 GLS2Q9UI32 602 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 PADI1Q9ULC6 663 aa11.78□□□□□ -0.52
COL6A2-204ENST00000409416 TMEM200CA6NKL6 621 aa11.77□□□□□ -0.52
COL6A2-204ENST00000409416 NPIPB7O75200 414 aa11.77□□□□□ -0.52
COL6A2-204ENST00000409416 NME2P22392 152 aa11.77□□□□□ -0.52
COL6A2-204ENST00000409416 NOVA1P51513 510 aaKnown RBP11.77□□□□□ -0.52
COL6A2-204ENST00000409416 SSBP1Q04837 148 aaKnown RBP11.77□□□□□ -0.52
COL6A2-204ENST00000409416 CEACAM16Q2WEN9 425 aa11.77□□□□□ -0.52
COL6A2-204ENST00000409416 ZNF813Q6ZN06 617 aa11.77□□□□□ -0.52
COL6A2-204ENST00000409416 A0A1B0GTQ1 180 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 ANKUB1A6NFN9 424 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 M0R135 149 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 CNOT4O95628 575 aaKnown RBP11.77□□□□□ -0.53
COL6A2-204ENST00000409416 LY86O95711 162 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 MEOX2P50222 304 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 PLEKHN1Q494U1 663 aaPredicted RBP11.77□□□□□ -0.53
COL6A2-204ENST00000409416 USF3Q68DE3 2245 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 CADM4Q8NFZ8 388 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 ZNF799Q96GE5 643 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 EFSO43281 561 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 PRH1P02810 166 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 CELA3AP09093 270 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 SELEP16581 610 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 FSTP19883 344 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 PVALBP20472 110 aaPredicted RBP11.77□□□□□ -0.53
COL6A2-204ENST00000409416 TSC22D1Q15714 1073 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 PHYHD1Q5SRE7 291 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 PDSS1Q5T2R2 415 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 PLCXD3Q63HM9 321 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 TFAP2EQ6VUC0 442 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 PEG10Q86TG7 708 aaKnown RBP11.77□□□□□ -0.53
COL6A2-204ENST00000409416 LURAP1LQ8IV03 231 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 OR51F2Q8NH61 342 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 RNF133Q8WVZ7 376 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 AQP3Q92482 292 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 MVB12AQ96EY5 273 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 KCNK17Q96T54 332 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 CHRDQ9H2X0 955 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 FAM206AQ9NX38 181 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 LHFPL6Q9Y693 200 aa11.77□□□□□ -0.53
COL6A2-204ENST00000409416 A0A0J9YW62 118 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 A0A1W2PQD3 144 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 TPT1P13693 172 aaKnown RBP11.76□□□□□ -0.53
COL6A2-204ENST00000409416 ZNF84P51523 738 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 CLDN15P56746 228 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
COL6A2-204ENST00000409416 RAB11FIP2Q7L804 512 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 MITD1Q8WV92 249 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 BORCS8Q96FH0 119 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 DUSP23Q9BVJ7 150 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 OR6C76A6NM76 312 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 FTCDNL1E5RQL4 147 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 IGHV3-13P01766 116 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 IGHV3-7P01780 117 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 GP1BAP07359 652 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 RNF224P0DH78 156 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 FLI1Q01543 452 aaPredicted RBP11.76□□□□□ -0.53
COL6A2-204ENST00000409416 ZNF616Q08AN1 781 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 IKZF1Q13422 519 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 H3F3CQ6NXT2 135 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 LPCAT3Q6P1A2 487 aa11.76□□□□□ -0.53
COL6A2-204ENST00000409416 CXorf67Q86X51 503 aaPredicted RBP11.76□□□□□ -0.53
COL6A2-204ENST00000409416 STX12Q86Y82 276 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms