RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 A8MVM7 634 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 BPNT1O95861 308 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 JMJD7P0C870 316 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 TUBG1P23258 451 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 TNFSF10P50591 281 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 SLC37A1P57057 533 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 FAM110CQ1W6H9 321 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 DEFB134Q4QY38 66 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 METRNLQ641Q3 311 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 ZNF66Q6ZN08 573 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 TIPARPQ7Z3E1 657 aaKnown RBP11.28□□□□□ -0.6
HERC3-203ENST00000407637 RNF144BQ7Z419 303 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 TMEFF1Q8IYR6 380 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 RAB42Q8N4Z0 105 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 ZPBPQ9BS86 351 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 ST6GALNAC5Q9BVH7 336 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 GAL3ST2Q9H3Q3 398 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 SRD5A3Q9H8P0 318 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 FKBP11Q9NYL4 201 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 C14orf166Q9Y224 244 aaKnown RBP11.28□□□□□ -0.6
HERC3-203ENST00000407637 NSG1A0A0A6YYJ2 146 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 ETV2O00321 342 aaPredicted RBP11.28□□□□□ -0.6
HERC3-203ENST00000407637 LCATP04180 440 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 AKR1A1P14550 325 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 FOLR1P15328 257 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 ATP6V0CP27449 155 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 PPM1AP35813 382 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 RAB11AP62491 216 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 RPL23AP62750 156 aaKnown RBP11.28□□□□□ -0.6
HERC3-203ENST00000407637 RUNX2Q13950 521 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 TAF9Q16594 264 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 C11orf42Q8N5U0 333 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 SLC26A10Q8NG04 563 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 OR2L3Q8NG85 312 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 RHBDD1Q8TEB9 315 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 SERINC2Q96SA4 455 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 KIAA2026Q5HYC2 2103 aa11.28□□□□□ -0.6
HERC3-203ENST00000407637 P2RY10O00398 339 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 CTSVO60911 334 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 HPRT1P00492 218 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 OPN1MWP04001 364 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 GUSBP08236 651 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 OPN1MW2P0DN77 364 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 OPN1MW3P0DN78 364 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 WNT5AP41221 380 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 VAMP2P63027 116 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 CSNK2A1P68400 391 aaPredicted RBP11.27□□□□□ -0.6
HERC3-203ENST00000407637 TMEM123Q8N131 208 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 CSNK2A3Q8NEV1 391 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 CLDND2Q8NHS1 167 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 EMG1Q92979 244 aaKnown RBP11.27□□□□□ -0.6
HERC3-203ENST00000407637 HLA-CQ95604 372 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 TSLPQ969D9 159 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 SPACA5Q96QH8 159 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 LPAR5Q9H1C0 372 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 LAMP3Q9UQV4 416 aa11.27□□□□□ -0.6
HERC3-203ENST00000407637 CXorf51AA0A1B0GTR3 108 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 LNP1A1A4G5 178 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 CDC14CA4D256 554 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 FGF17O60258 216 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 KAT7O95251 611 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 CNOT4O95628 575 aaKnown RBP11.27□□□□□ -0.61
HERC3-203ENST00000407637 MPIG6BO95866 241 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 HIST1H1DP16402 221 aaKnown RBP11.27□□□□□ -0.61
HERC3-203ENST00000407637 CDK3Q00526 305 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 CDCP2Q5VXM1 449 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 VN1R4Q7Z5H5 301 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 CACUL1Q86Y37 369 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 MFSD9Q8NBP5 474 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 NECAP1Q8NC96 275 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 OR1N1Q8NGS0 311 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 REEP6Q96HR9 211 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 OR2J1Q9GZK6 312 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 FOXJ2Q9P0K8 574 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 NAGKQ9UJ70 344 aa11.27□□□□□ -0.61
HERC3-203ENST00000407637 ITGB1BP1O14713 200 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 DUSP11O75319 330 aaKnown RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 OR6A2O95222 327 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 RPLP2P05387 115 aaKnown RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 BCKDHBP21953 392 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 PEBP1P30086 187 aaKnown RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 CTHP32929 405 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 GNB2P62879 340 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 ZFP36L1Q07352 338 aaKnown RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 SGCGQ13326 291 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 ARFRP1Q13795 201 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 GPR157Q5UAW9 335 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 C1orf140Q5VVS0 124 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 FAM90A2PQ658T7 463 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 TMEM52Q8NDY8 209 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 STT3BQ8TCJ2 826 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 C8orf44Q96CB5 159 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 ARHGAP5-AS1Q96IT6 56 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 ABHD6Q9BV23 337 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 VN1R3Q9BXE9 311 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 BANF2Q9H503 90 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 MMP25Q9NPA2 562 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms