RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 DNAAF1Q8NEP3 725 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 OR11L1Q8NGX0 322 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 HPS1Q92902 700 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 ORAI1Q96D31 301 aa24.72■■□□□ 1.55
USP42-202ENST00000404008 VWC2LB2RUY7 222 aa24.71■■□□□ 1.55
USP42-202ENST00000404008 TMEM178BH3BS89 294 aa24.71■■□□□ 1.55
USP42-202ENST00000404008 CCRL2O00421 344 aa24.71■■□□□ 1.55
USP42-202ENST00000404008 CDIPTO14735 213 aa24.71■■□□□ 1.55
USP42-202ENST00000404008 SMIM18P0DKX4 95 aa24.71■■□□□ 1.55
USP42-202ENST00000404008 PRKACBP22694 351 aa24.71■■□□□ 1.55
USP42-202ENST00000404008 GP2P55259 537 aaKnown RBP24.71■■□□□ 1.55
USP42-202ENST00000404008 BORCS8Q96FH0 119 aa24.71■■□□□ 1.55
USP42-202ENST00000404008 VCX3AQ9NNX9 186 aa24.71■■□□□ 1.55
USP42-202ENST00000404008 IGKV1-27A0A075B6S5 117 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 A0A1W2PPK0 400 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 PPIHO43447 177 aaKnown RBP24.7■■□□□ 1.55
USP42-202ENST00000404008 CYB5R3P00387 301 aaPredicted RBP24.7■■□□□ 1.55
USP42-202ENST00000404008 IRF2P14316 349 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 IGFBP3P17936 291 aaPredicted RBP24.7■■□□□ 1.55
USP42-202ENST00000404008 FSTP19883 344 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 RAB3AP20336 220 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 WDR82Q6UXN9 313 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 ZNF573Q86YE8 665 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 BPESC1Q9GZL8 116 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 NOX4Q9NPH5 578 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 RNF7Q9UBF6 113 aa24.7■■□□□ 1.55
USP42-202ENST00000404008 PIN1P1O15428 100 aa24.69■■□□□ 1.54
USP42-202ENST00000404008 GPX5O75715 221 aa24.69■■□□□ 1.54
USP42-202ENST00000404008 OCMP0CE72 109 aaPredicted RBP24.69■■□□□ 1.54
USP42-202ENST00000404008 NR4A2P43354 598 aa24.69■■□□□ 1.54
USP42-202ENST00000404008 GPR6P46095 362 aaPredicted RBP24.69■■□□□ 1.54
USP42-202ENST00000404008 HAAOP46952 286 aa24.69■■□□□ 1.54
USP42-202ENST00000404008 RBP2P50120 134 aa24.69■■□□□ 1.54
USP42-202ENST00000404008 TMEM91Q6ZNR0 172 aa24.69■■□□□ 1.54
USP42-202ENST00000404008 OR51A2Q8NGJ7 313 aa24.69■■□□□ 1.54
USP42-202ENST00000404008 CKLFQ9UBR5 152 aa24.69■■□□□ 1.54
USP42-202ENST00000404008 hCG_1807616A0A1W2PRN6 198 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 RGS9O75916 674 aaPredicted RBP24.68■■□□□ 1.54
USP42-202ENST00000404008 SLC25A16P16260 332 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 PPP3R1P63098 170 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 FABP5Q01469 135 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 HAGHLQ6PII5 290 aaPredicted RBP24.68■■□□□ 1.54
USP42-202ENST00000404008 LHFPL2Q6ZUX7 228 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 CEACAM19Q7Z692 300 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 CALHM1Q8IU99 346 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 C1orf87Q8N0U7 546 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 AQP3Q92482 292 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 NEK6Q9HC98 313 aa24.68■■□□□ 1.54
USP42-202ENST00000404008 TRAV8-7A0A075B6U6 113 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 TRIM64BA6NI03 449 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 JUNBP17275 347 aaPredicted RBP24.67■■□□□ 1.54
USP42-202ENST00000404008 CFHR2P36980 270 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 TGFBR2P37173 567 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 ATP1B3P54709 279 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 FAM27D1Q5T7N8 215 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 PEG10Q86TG7 708 aaKnown RBP24.67■■□□□ 1.54
USP42-202ENST00000404008 ANGPTL5Q86XS5 388 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 TIMD4Q96H15 378 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 WIPI2Q9Y4P8 454 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 NPTNQ9Y639 398 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 J3QT63 122 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 RHBDL1O75783 438 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 LHBP01229 141 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 HCKP08631 526 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 MPZP25189 248 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 MTCP1P56278 107 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 CD200R1LQ6Q8B3 271 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 SPNS3Q6ZMD2 512 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 GCSAMQ8N6F7 178 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 OR10Z1Q8NGY1 313 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 LRRC29Q8WV35 223 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 RAB1CQ92928 201 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 SPACA5Q96QH8 159 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 PPIL3Q9H2H8 161 aaKnown RBP24.67■■□□□ 1.54
USP42-202ENST00000404008 METTL17Q9H7H0 456 aaPredicted RBP24.67■■□□□ 1.54
USP42-202ENST00000404008 FOXJ3Q9UPW0 622 aa24.67■■□□□ 1.54
USP42-202ENST00000404008 MAGEA13PA6NCF6 341 aa24.66■■□□□ 1.54
USP42-202ENST00000404008 GABRPO00591 440 aa24.66■■□□□ 1.54
USP42-202ENST00000404008 UCHL1P09936 223 aa24.66■■□□□ 1.54
USP42-202ENST00000404008 HOXA4Q00056 320 aaPredicted RBP24.66■■□□□ 1.54
USP42-202ENST00000404008 AVPI1Q5T686 147 aa24.66■■□□□ 1.54
USP42-202ENST00000404008 CRIP3Q6Q6R5 217 aa24.66■■□□□ 1.54
USP42-202ENST00000404008 RNF144BQ7Z419 303 aa24.66■■□□□ 1.54
USP42-202ENST00000404008 PKIBQ9C010 78 aa24.66■■□□□ 1.54
USP42-202ENST00000404008 TMEM138Q9NPI0 162 aa24.66■■□□□ 1.54
USP42-202ENST00000404008 FLNAP21333 2647 aaKnown RBP24.65■■□□□ 1.54
USP42-202ENST00000404008 SYNGR1O43759 233 aa24.65■■□□□ 1.54
USP42-202ENST00000404008 IGHV2-70P01814 119 aa24.65■■□□□ 1.54
USP42-202ENST00000404008 ALDOBP05062 364 aa24.65■■□□□ 1.54
USP42-202ENST00000404008 BTG1P62324 171 aa24.65■■□□□ 1.54
USP42-202ENST00000404008 FAM201AQ5SY85 155 aa24.65■■□□□ 1.54
USP42-202ENST00000404008 PHYHIPQ92561 330 aa24.65■■□□□ 1.54
USP42-202ENST00000404008 MRPS26Q9BYN8 205 aaKnown RBP24.65■■□□□ 1.54
USP42-202ENST00000404008 A0A096LNT2 108 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 MAGEB3O15480 346 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 EGR1P18146 543 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 BDKRB2P30411 391 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 IL24Q13007 206 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 ZMYND11Q15326 602 aa24.64■■□□□ 1.53
USP42-202ENST00000404008 KISS1Q15726 138 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms