RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 CLN5O75503 358 aa12.4□□□□□ -0.42
HMGA2-204ENST00000403681 FAHP16930 419 aa12.4□□□□□ -0.42
HMGA2-204ENST00000403681 TNFRSF4P43489 277 aa12.4□□□□□ -0.42
HMGA2-204ENST00000403681 LBX1P52954 281 aa12.4□□□□□ -0.42
HMGA2-204ENST00000403681 HABP2Q14520 560 aaPredicted RBP12.4□□□□□ -0.42
HMGA2-204ENST00000403681 KCNIP4Q6PIL6 250 aa12.4□□□□□ -0.42
HMGA2-204ENST00000403681 C6orf201Q7Z4U5 140 aa12.4□□□□□ -0.42
HMGA2-204ENST00000403681 PLXDC1Q8IUK5 500 aa12.4□□□□□ -0.42
HMGA2-204ENST00000403681 TM4SF19Q96DZ7 209 aa12.4□□□□□ -0.42
HMGA2-204ENST00000403681 BCO1Q9HAY6 547 aa12.4□□□□□ -0.42
HMGA2-204ENST00000403681 FAM24AA6NFZ4 105 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 H3BQ15 152 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 LMX1BO60663 402 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 ABHD16AO95870 558 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 GAPDHP04406 335 aaKnown RBP12.39□□□□□ -0.43
HMGA2-204ENST00000403681 OR5AC1P0C628 307 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 CD79AP11912 226 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 DEFB133Q30KQ1 61 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 OR4A4PQ8NGN8 299 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 PLK3Q9H4B4 646 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 C19orf25Q9UFG5 118 aaPredicted RBP12.39□□□□□ -0.43
HMGA2-204ENST00000403681 PILRAQ9UKJ1 303 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 LIPGQ9Y5X9 500 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 PIAS3Q9Y6X2 628 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 RP1P56715 2156 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 OTOL1A6NHN0 477 aaPredicted RBP12.39□□□□□ -0.43
HMGA2-204ENST00000403681 SURF2Q15527 256 aaPredicted RBP12.39□□□□□ -0.43
HMGA2-204ENST00000403681 ANKRD55Q3KP44 614 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 RABEPKQ7Z6M1 372 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 BADQ92934 168 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 RHOVQ96L33 236 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 TUBG2Q9NRH3 451 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 MRPL22Q9NWU5 206 aaKnown RBP12.39□□□□□ -0.43
HMGA2-204ENST00000403681 LAMP3Q9UQV4 416 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 APC2O95996 2303 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 IGKV1D-42A0A075B6H8 117 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 IGHV3-20A0A0C4DH32 117 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 DUX1O43812 170 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 ROM1Q03395 351 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 ZNF658BQ4V348 819 aaPredicted RBP12.39□□□□□ -0.43
HMGA2-204ENST00000403681 IL1F10Q8WWZ1 152 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 ANGPTL7O43827 346 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 GPR3P46089 330 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 VAX1Q5SQQ9 334 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 ALKBH2Q6NS38 261 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 REEP6Q96HR9 211 aa12.39□□□□□ -0.43
HMGA2-204ENST00000403681 WDR90Q96KV7 1748 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 ELOA3CA0A087WX78 387 aaPredicted RBP12.38□□□□□ -0.43
HMGA2-204ENST00000403681 TRBV11-1A0A0K0K1C0 115 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 A0A1W2PNR3 127 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 ONECUT2O95948 504 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 IL2RAP01589 272 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 RPS2P15880 293 aaKnown RBP12.38□□□□□ -0.43
HMGA2-204ENST00000403681 BCKDHBP21953 392 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 AADACP22760 399 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 MMP16P51512 607 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 DLK1P80370 383 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 UBE2V2Q15819 145 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 OR2C3Q8N628 320 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 C5orf66Q9H5L9 145 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 PLEKHF2Q9H8W4 249 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 TREM2Q9NZC2 230 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 NPIPB9F8W1W9 429 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 HEXAP06865 529 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 HKR1P10072 659 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 NOVA1P51513 510 aaKnown RBP12.38□□□□□ -0.43
HMGA2-204ENST00000403681 RPS4XP62701 263 aaKnown RBP12.38□□□□□ -0.43
HMGA2-204ENST00000403681 HBG1P69891 147 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 HBG2P69892 147 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 ZNF787Q6DD87 383 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 PRR18Q8N4B5 295 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 INTS12Q96CB8 462 aaKnown RBP12.38□□□□□ -0.43
HMGA2-204ENST00000403681 FOXQ1Q9C009 403 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 RER1O15258 196 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 HLA-HP01893 362 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 BGLAPP02818 100 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 CTSDP07339 412 aaPredicted RBP12.38□□□□□ -0.43
HMGA2-204ENST00000403681 MELTFP08582 738 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 P2RY4P51582 365 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 TMEM41BQ5BJD5 291 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 TSPO2Q5TGU0 170 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 LURAP1LQ8IV03 231 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 BATF2Q8N1L9 274 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 ST8SIA1Q92185 356 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 NTNG2Q96CW9 530 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 PACRGQ96M98 296 aaPredicted RBP12.38□□□□□ -0.43
HMGA2-204ENST00000403681 VN1R1Q9GZP7 353 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 ALKBH4Q9NXW9 302 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 DOK5Q9P104 306 aa12.38□□□□□ -0.43
HMGA2-204ENST00000403681 FTCDNL1E5RQL4 147 aa12.37□□□□□ -0.43
HMGA2-204ENST00000403681 HSPB6O14558 160 aa12.37□□□□□ -0.43
HMGA2-204ENST00000403681 TRAPPC6AO75865 159 aa12.37□□□□□ -0.43
HMGA2-204ENST00000403681 PRF1P14222 555 aa12.37□□□□□ -0.43
HMGA2-204ENST00000403681 PKIAP61925 76 aa12.37□□□□□ -0.43
HMGA2-204ENST00000403681 IL13RA2Q14627 380 aa12.37□□□□□ -0.43
HMGA2-204ENST00000403681 TMEM196Q5HYL7 178 aa12.37□□□□□ -0.43
HMGA2-204ENST00000403681 CCDC54Q8NEL0 328 aa12.37□□□□□ -0.43
HMGA2-204ENST00000403681 TMEM18Q96B42 140 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms