RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SEMG1P04279 462 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 NHLRC4P0CG21 123 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CD24P25063 80 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 GPM6AP51674 278 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 DYNLT3P51808 116 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SLC7A2P52569 658 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TAF13Q15543 124 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CGB2Q6NT52 195 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ACP7Q6ZNF0 438 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 KCTD8Q6ZWB6 473 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 THAP5Q7Z6K1 395 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CSNK2A3Q8NEV1 391 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 OR2T27Q8NH04 317 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RNF133Q8WVZ7 376 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 AQP3Q92482 292 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 PIGCQ92535 297 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 MALSU1Q96EH3 234 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ABHD6Q9BV23 337 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CHID1Q9BWS9 393 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 GID8Q9NWU2 228 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TBL2Q9Y4P3 447 aaKnown RBP9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 LRP12Q9Y561 859 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 MPC1Q9Y5U8 109 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ALMS1Q8TCU4 4167 aa9.46□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ANXA2P2A6NMY6 339 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 LPLP06858 475 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 PIPP12273 146 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OPRL1P41146 370 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CAPZA1P52907 286 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CRMP1Q14194 572 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ARSJQ5FYB0 599 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 KRT74Q7RTS7 529 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CENPVQ7Z7K6 275 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 BATF2Q8N1L9 274 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR11H6Q8NGC7 330 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR4C15Q8NGM1 316 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR2T4Q8NH00 348 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TFAP2CQ92754 450 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR8B4Q96RC9 309 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ABCB10Q9NRK6 738 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 USE1Q9NZ43 259 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CD300AQ9UGN4 299 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 HILPDAQ9Y5L2 63 aa9.46□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZNF732B4DXR9 585 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 GSTA4O15217 222 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 GLCEO94923 617 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 SPI1P17947 270 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 PRDX2P32119 198 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 THBS3P49746 956 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 GRB2P62993 217 aaKnown RBP9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 EIF2B1Q14232 305 aaKnown RBP9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CEP78Q5JTW2 689 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 BAIAP2L2Q6UXY1 529 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZDHHC23Q8IYP9 409 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR4Q3Q8NH05 313 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 DYDC1Q8WWB3 177 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 FOXRED1Q96CU9 486 aaPredicted RBP9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 PGAM5Q96HS1 289 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ATP6V1G3Q96LB4 118 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 PRR25Q96S07 402 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR10A2Q9H208 303 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 PITPNC1Q9UKF7 332 aa9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 FAM32AQ9Y421 112 aaKnown RBP9.45□□□□□ -0.9
SPTLC1P3-201ENST00000403408 LCE6AA0A183 80 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 F2RL2O00254 374 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 SNRNP70P08621 437 aaKnown RBP9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 FMO3P31513 532 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TSPAN31Q12999 210 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ABCA11PQ4W5N1 156 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZNF770Q6IQ21 691 aaPredicted RBP9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 HAGHLQ6PII5 290 aaPredicted RBP9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR8B12Q8NGG6 310 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR52H1Q8NGJ2 320 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 MUC7Q8TAX7 377 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 FAM162AQ96A26 154 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 DUX3Q96PT4 197 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 MED20Q9H944 212 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 DCAF13Q9NV06 445 aaKnown RBP9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 INTS9Q9NV88 658 aaKnown RBP9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TAS2R1Q9NYW7 299 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 V9GYQ6 96 aa9.44□□□□□ -0.9
SPTLC1P3-201ENST00000403408 RYR1P21817 5038 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 MMP23AO75900 390 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 GADD45GO95257 159 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TK1P04183 234 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 IGHV1-8P0DP01 117 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 PAICSP22234 425 aaKnown RBP9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 LMO1P25800 156 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 HSD11B1P28845 292 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 SLC34A1Q06495 639 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 LCN8Q6JVE9 175 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 C8orf86Q6ZUL3 223 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TIGD4Q8IY51 512 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 POC1AQ8NBT0 407 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR9Q2Q8NGE9 314 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 BCAS4Q8TDM0 211 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 GNPDA2Q8TDQ7 276 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 P2RX4Q99571 388 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZNF649Q9BS31 505 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms